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AI115009 Gene Detail
Summary
  • Symbol
    AI115009
  • Name
    expressed sequence AI115009
  • Feature Type
    antisense lncRNA gene
  • IDs
    MGI:2139623
    NCBI Gene: 99542
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr3:152666913-152681432 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 77.16 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2139623
antisense lncRNA gene Chr3:152666913-152681432 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003859
antisense lncRNA gene Chr3:156550878-156565262 (+)
A/J MGP_AJ_G0003839
antisense lncRNA gene Chr3:150865063-150879696 (+)
AKR/J MGP_AKRJ_G0003816
antisense lncRNA gene Chr3:154859331-154881202 (+)
BALB/cJ MGP_BALBcJ_G0003826
antisense lncRNA gene Chr3:150683308-150697827 (+)
C3H/HeJ MGP_C3HHeJ_G0003771
antisense lncRNA gene Chr3:155269326-155285614 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003970
antisense lncRNA gene Chr3:161694376-161708895 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003470
antisense lncRNA gene Chr3:145668542-145683293 (+)
CAST/EiJ MGP_CASTEiJ_G0003737
antisense lncRNA gene Chr3:155349137-155364741 (+)
CBA/J MGP_CBAJ_G0003765
antisense lncRNA gene Chr3:167511516-167526025 (+)
DBA/2J MGP_DBA2J_G0003780
antisense lncRNA gene Chr3:149966833-149981352 (+)
FVB/NJ MGP_FVBNJ_G0003801
antisense lncRNA gene Chr3:147340663-147355459 (+)
LP/J MGP_LPJ_G0003861
antisense lncRNA gene Chr3:157904344-157918730 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003788
antisense lncRNA gene Chr3:176036736-176052711 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003969
antisense lncRNA gene Chr3:154532479-154546988 (+)
PWK/PhJ MGP_PWKPhJ_G0003693
antisense lncRNA gene Chr3:149861302-149875858 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003638
antisense lncRNA gene Chr3:152682244-152696916 (+)
WSB/EiJ MGP_WSBEiJ_G0003773
antisense lncRNA gene Chr3:155522987-155541185 (+)



Homology
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 99542 NCBI Gene Model | MGI Sequence Detail 14520 C57BL/6J ±  kb
transcript NR_040386 RefSeq | MGI Sequence Detail 1853 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 10
  • Earliest
    J:57656 Lennon G, et al., WashU-HHMI Mouse EST Project. Database Download. 1999;
  • Latest
    J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/04/2019
MGI 6.14
The Jackson Laboratory