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Thnsl1 Gene Detail
Summary
  • Symbol
    Thnsl1
  • Name
    threonine synthase-like 1 (bacterial)
  • Feature Type
    protein coding gene
  • IDs
    MGI:2139347
    NCBI Gene: 208967
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:21205724-21215009 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 14.83 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    33 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2139347
protein coding gene Chr2:21205357-21215009 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025388
protein coding gene Chr2:19022428-19031713 (+)
A/J MGP_AJ_G0025366
protein coding gene Chr2:18247815-18257107 (+)
AKR/J MGP_AKRJ_G0025334
protein coding gene Chr2:18906194-18915486 (+)
BALB/cJ MGP_BALBcJ_G0025361
protein coding gene Chr2:18309197-18318519 (+)
C3H/HeJ MGP_C3HHeJ_G0025121
protein coding gene Chr2:18775749-18785799 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025804
protein coding gene Chr2:19568729-19578038 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023219
protein coding gene Chr2:17536262-17545936 (+)
CAST/EiJ MGP_CASTEiJ_G0024585
protein coding gene Chr2:18743908-18753286 (+)
CBA/J MGP_CBAJ_G0025100
protein coding gene Chr2:20349944-20359204 (+)
DBA/2J MGP_DBA2J_G0025232
protein coding gene Chr2:18161955-18171222 (+)
FVB/NJ MGP_FVBNJ_G0025195
protein coding gene Chr2:17955292-17964551 (+)
LP/J MGP_LPJ_G0025319
protein coding gene Chr2:18854248-18863545 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025226
protein coding gene Chr2:20285338-20294598 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025862
protein coding gene Chr2:18793758-18803031 (+)
PWK/PhJ MGP_PWKPhJ_G0024334
protein coding gene Chr2:18034491-18043776 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024134
protein coding gene Chr2:19014972-19024268 (+)
WSB/EiJ MGP_WSBEiJ_G0024655
protein coding gene Chr2:18874799-18884145 (+)



Homology
more
  • Human Ortholog
    THNSL1, threonine synthase like 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    THNSL1, threonine synthase like 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    TSH1
  • Links
    NCBI Gene ID: 79896
    neXtProt AC: NX_Q8IYQ7
    UniProt: Q8IYQ7

  • Chr Location
    10p12.1; chr10:24952319-25026664 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 32609
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: THNSL1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000048550 Ensembl Gene Model | MGI Sequence Detail 9286 C57BL/6J ±  kb
transcript ENSMUST00000054591 Ensembl | MGI Sequence Detail 3899 Not Applicable  
polypeptide ENSMUSP00000052452 Ensembl | MGI Sequence Detail 747 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    7 Sequences
  • Protein Ontology
    PR:000016308 threonine synthase-like 1
  • InterPro Domains
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
    IPR031322 Shikimate kinase/gluconokinase
    IPR000623 Shikimate kinase/Threonine synthase-like 1
    IPR004450 Threonine synthase-like
    IPR029144 Threonine synthase, N-terminal
    IPR037158 Threonine synthase, N-terminal domain superfamily
    IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme
Molecular
Reagents
less
  • All nucleic 25
    cDNA 25

    Microarray probesets 3
References
more
  • Summaries
    All 23
    Developmental Gene Expression 2
    Phenotypes 5
  • Earliest
    J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory