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Tspyl3 Gene Detail
Summary
  • Symbol
    Tspyl3
  • Name
    TSPY-like 3
  • Synonyms
    LOC241732, MGC:58351
  • Feature Type
    protein coding gene
  • IDs
    MGI:2139328
    NCBI Gene: 241732
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:153064290-153067361 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 75.41 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    51 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2139328
 protein coding gene Chr2:153064290-153067361 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016710
 protein coding gene Chr1:172690470-172692587 (+)
A/J no annotation
AKR/J MGP_AKRJ_G0026625
 protein coding gene Chr2:155952427-155958174 (-)
BALB/cJ MGP_BALBcJ_G0026664
 protein coding gene Chr2:151836081-151839365 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0027113
 protein coding gene Chr2:162426434-162429719 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024484
 protein coding gene Chr2:145104555-145107681 (-)
CAST/EiJ MGP_CASTEiJ_G0025868
 protein coding gene Chr2:156583361-156586433 (-)
CBA/J MGP_CBAJ_G0026385
 protein coding gene Chr2:168397303-168402150 (-)
DBA/2J MGP_DBA2J_G0026521
 protein coding gene Chr2:150734334-150737406 (-)
FVB/NJ MGP_FVBNJ_G0026487
 protein coding gene Chr2:149202877-149205948 (-)
LP/J MGP_LPJ_G0026625
 protein coding gene Chr2:157986259-157989635 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026508
 protein coding gene Chr2:172443378-172446450 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017149
 protein coding gene Chr1:170525553-170527777 (+)
PWK/PhJ MGP_PWKPhJ_G0025602
 protein coding gene Chr2:150268998-150272070 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025405
 protein coding gene Chr2:154685304-154688377 (-)
WSB/EiJ MGP_WSBEiJ_G0025938
 protein coding gene Chr2:156750030-156753101 (-)



Homology
more
  • Human Ortholog
    TSPY26P, testis specific protein Y-linked 26, pseudogene
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TSPY26P, testis specific protein Y-linked 26, pseudogene
  • Synonyms
    bA392M18.1, TSPYL3
  • Links
    NCBI Gene ID: 128854
    UniProt: Q9H489

  • Chr Location
    20q11.21; chr20:32189146-32190527 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    24
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 241732 NCBI Gene Model | MGI Sequence Detail 3072 C57BL/6J ±  kb
transcript NM_198617 RefSeq | MGI Sequence Detail 3087 C57BL/6  
polypeptide NP_941019 RefSeq | MGI Sequence Detail 334 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR037231 NAP-like superfamily
    IPR002164 Nucleosome assembly protein (NAP)
Molecular
Reagents
less
  • All nucleic 24
    cDNA 24

    Microarray probesets 5
Other
Accession IDs
less
MGI:2684882
References
more
  • Summaries
    All 20
    Gene Ontology 1
    Phenotypes 1
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory