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Slc39a12 Gene Detail
Summary
  • Symbol
    Slc39a12
  • Name
    solute carrier family 39 (zinc transporter), member 12
  • Synonyms
    LOC277468
  • Feature Type
    protein coding gene
  • IDs
    MGI:2139274
    NCBI Gene: 277468
Location & Maps
more
  • Sequence Map
    Chr2:14388316-14494977 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      106662 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 10.56 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SLC39A12, solute carrier family 39 member 12
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SLC39A12, solute carrier family 39 member 12
    Orthology source: HomoloGene
  • Synonyms
    bA570F3.1, LZT-Hs8, ZIP-12
  • Links
    NCBI Gene ID: 221074
    neXtProt AC: NX_Q504Y0

  • Chr Location
    10p12.33; chr10:17951839-18043292 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000011408 VEGA Gene Model | MGI Sequence Detail 106662 C57BL/6J ±  kb
transcript OTTMUST00000026695 VEGA | MGI Sequence Detail 2675 Not Applicable  
polypeptide OTTMUSP00000012203 VEGA | MGI Sequence Detail 689 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    303 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000015126 zinc transporter ZIP12
  • InterPro Domains
    IPR003689 Zinc/iron permease
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 3
Other
Accession IDs
less
MGI:2685577
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 2
  • Earliest
    J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
  • Latest
    J:197394 Chowanadisai W, et al., Neurulation and neurite extension require the zinc transporter ZIP12 (slc39a12). Proc Natl Acad Sci U S A. 2013 Jun 11;110(24):9903-8

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/22/2016
MGI 6.04
The Jackson Laboratory