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Tm9sf4 Gene Detail
Summary
  • Symbol
    Tm9sf4
  • Name
    transmembrane 9 superfamily protein member 4
  • Synonyms
    mKIAA0255
  • Feature Type
    protein coding gene
  • IDs
    MGI:2139220
    NCBI Gene: 99237
Location & Maps
more
  • Sequence Map
    Chr2:153161303-153210466 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      49164 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 75.41 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    TM9SF4, transmembrane 9 superfamily member 4
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TM9SF4, transmembrane 9 superfamily member 4
    Orthology source: HomoloGene
  • Synonyms
    dJ836N17.2
  • Links
    NCBI Gene ID: 9777
    neXtProt AC: NX_Q92544

  • Chr Location
    20q11.21; chr20:32109506-32167258 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    14 phenotypes from 1 allele in 2 genetic backgrounds
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygous mutants exhibit abnormal hair follicles and sebaceous glands, vertebrae and rib abnormalities, and increased circulating cholesterol, calcium, albumin, and total protein levels.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015775 VEGA Gene Model | MGI Sequence Detail 49164 C57BL/6J ±  kb
transcript OTTMUST00000037483 VEGA | MGI Sequence Detail 3896 Not Applicable  
polypeptide OTTMUSP00000016800 VEGA | MGI Sequence Detail 643 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    286 from dbSNP Build 142
Protein
Information
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  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000032375 transmembrane 9 superfamily member 4
  • InterPro Domains
    IPR004240 Nonaspanin (TM9SF)
Molecular
Reagents
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  • All nucleic 138
    cDNA 138

    Microarray probesets 4
Other
Accession IDs
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MGI:2138821
References
more
  • Summaries
    All 37
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 11
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:209956 Liakath-Ali K, et al., Novel skin phenotypes revealed by a genome-wide mouse reverse genetic screen. Nat Commun. 2014;5:3540

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory