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Ssx2ip Gene Detail
Summary
  • Symbol
    Ssx2ip
  • Name
    synovial sarcoma, X breakpoint 2 interacting protein
  • Synonyms
    Adip
  • Feature Type
    protein coding gene
  • IDs
    MGI:2139150
    NCBI Gene: 99167
  • Gene Overview
    MyGene.info: SSX2IP
Location & Maps
more
  • Sequence Map
    Chr3:146404642-146440144 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      35503 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 71.03 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SSX2IP, SSX family member 2 interacting protein
  • Vertebrate Orthologs
    11
  • Human Ortholog
    SSX2IP, SSX family member 2 interacting protein
    Orthology source: HGNC, HomoloGene
  • Synonyms
    ADIP
  • Links
    NCBI Gene ID: 117178
    neXtProt AC: NX_Q9Y2D8

  • Chr Location
    1p22.3; chr1:84643707-84690757 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 8522
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;2 zebrafish
  • HCOP
    human homology predictions: SSX2IP
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    16
  • Endonuclease-mediated
    1
  • Gene trapped
    14
  • Radiation induced
    1
  • Genomic Mutations
    1 involving Ssx2ip
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022292 VEGA Gene Model | MGI Sequence Detail 35503 C57BL/6J ±  kb
transcript OTTMUST00000053099 VEGA | MGI Sequence Detail 3446 Not Applicable  
polypeptide OTTMUSP00000025231 VEGA | MGI Sequence Detail 615 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    357 from dbSNP Build 142
Protein
Information
less
  • UniProt
    5 Sequences
  • Protein Ontology
    PR:000015669 afadin- and alpha-actinin-binding protein
  • InterPro Domains
    IPR021622 Afadin/alpha-actinin-binding
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 7
Other
Accession IDs
less
MGI:2139910
References
more
  • Summaries
    All 30
    Gene Ontology 6
    Phenotypes 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:215958 Klinger M, et al., The novel centriolar satellite protein SSX2IP targets Cep290 to the ciliary transition zone. Mol Biol Cell. 2014 Feb;25(4):495-507

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory