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Usp6nl Gene Detail
Summary
  • Symbol
    Usp6nl
  • Name
    USP6 N-terminal like
  • Synonyms
    mKIAA0019, TRE2NL
  • Feature Type
    protein coding gene
  • IDs
    MGI:2138893
    NCBI Gene: 98910
  • Gene Overview
    MyGene.info: USP6NL
Location & Maps
more
  • Sequence Map
    Chr2:6322667-6446390 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      123724 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 3.63 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    USP6NL, USP6 N-terminal like
  • Vertebrate Orthologs
    8
  • Human Ortholog
    USP6NL, USP6 N-terminal like
    Orthology source: HGNC, HomoloGene
  • Synonyms
    RNTRE, TRE2NL, USP6NL-IT1
  • Links
    NCBI Gene ID: 9712
    neXtProt AC: NX_Q92738

  • Chr Location
    10p13; chr10:11460510-11611789 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000011789 VEGA Gene Model | MGI Sequence Detail 123724 C57BL/6J ±  kb
transcript OTTMUST00000027677 VEGA | MGI Sequence Detail 4340 Not Applicable  
polypeptide OTTMUSP00000012578 VEGA | MGI Sequence Detail 842 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    581 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000017195 USP6 N-terminal-like protein
  • InterPro Domains
    IPR000195 Rab-GTPase-TBC domain
Molecular
Reagents
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  • All nucleic 9
    cDNA 9

    Microarray probesets 3
References
more
  • Summaries
    All 30
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory