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Stum Gene Detail
Summary
  • Symbol
    Stum
  • Name
    mechanosensory transduction mediator
  • Synonyms
    6330403A02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2138735
    NCBI Gene: 381310
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:180259952-180311069 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 84.34 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    599 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2138735
 protein coding gene Chr1:180259938-180311199 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016869
 protein coding gene Chr1:186862062-186917717 (-)
A/J MGP_AJ_G0016848
 protein coding gene Chr1:179308796-179360113 (-)
AKR/J MGP_AKRJ_G0016814
 protein coding gene Chr1:184639259-184695009 (-)
BALB/cJ MGP_BALBcJ_G0016806
 protein coding gene Chr1:179931630-179983032 (-)
C3H/HeJ MGP_C3HHeJ_G0016631
 protein coding gene Chr1:185403438-185455681 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017269
 protein coding gene Chr1:192880294-192936064 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014977
 protein coding gene Chr1:170287431-170349497 (-)
CAST/EiJ MGP_CASTEiJ_G0016212
 protein coding gene Chr1:184740825-184799705 (-)
CBA/J MGP_CBAJ_G0016605
 protein coding gene Chr1:200054248-200114004 (-)
DBA/2J MGP_DBA2J_G0016711
 protein coding gene Chr1:178148377-178200830 (-)
FVB/NJ MGP_FVBNJ_G0016707
 protein coding gene Chr1:176243423-176295136 (-)
LP/J MGP_LPJ_G0016785
 protein coding gene Chr1:188125493-188177642 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016738
 protein coding gene Chr1:207242401-207298175 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017306
 protein coding gene Chr1:184417705-184471762 (-)
PWK/PhJ MGP_PWKPhJ_G0016000
 protein coding gene Chr1:177238603-177291618 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015776
 protein coding gene Chr1:183350836-183404351 (-)
WSB/EiJ MGP_WSBEiJ_G0016275
 protein coding gene Chr1:184613663-184671251 (-)



Homology
more
  • Human Ortholog
    STUM, stum, mechanosensory transduction mediator homolog
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    STUM, stum, mechanosensory transduction mediator homolog
  • Synonyms
    C1orf95
  • Links
    NCBI Gene ID: 375057
    neXtProt AC: NX_Q69YW2
    UniProt: Q69YW2

  • Chr Location
    1q42.12; chr1:226548764-226609230 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    710
  • Tissues
    2
  • cDNA Data
    17
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000053963 Ensembl Gene Model | MGI Sequence Detail 51118 C57BL/6J ±  kb
transcript ENSMUST00000136521 Ensembl | MGI Sequence Detail 6506 Not Applicable  
polypeptide ENSMUSP00000119782 Ensembl | MGI Sequence Detail 141 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 18
    cDNA 17
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:225275 Desai BS, et al., The stum gene is essential for mechanical sensing in proprioceptive neurons. Science. 2014 Mar 14;343(6176):1256-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory