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Obsl1
Gene Detail
 Symbol
Name
ID
Obsl1
obscurin-like 1
MGI:2138628
Feature Type protein coding gene
Genetic Map
Chromosome 1
39.15 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr1:75479310-75506452 bp, - strand
From VEGA annotation of GRCm38

  27143 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Gene Tree: Obsl1
Mutations,
alleles, and
phenotypes
All mutations/alleles(15) : Gene trapped(14) Spontaneous(1)
Genomic Mutations involving Obsl1 (1)
Incidental mutations (data from Mutagenetix , APF )
Alleles Annotated to Human Diseases(1)   
Interactions
Obsl1 interacts with 124 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (1 annotations)
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(72)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(73) cDNA(73)
Microarray probesets(8)
Other database
links
VEGA Gene ModelOTTMUSG00000016912 (Evidence)
Ensembl Gene ModelENSMUSG00000026211 (Evidence)
Entrez Gene98733 (Evidence)
UniGene236454
DFCITC1582112, TC1585988, TC1586500, TC1623479, TC1633960, TC1684652
DoTSDT.101391621, DT.101736826, DT.101736828, DT.110939759, DT.40164046, DT.489150, DT.60108228, DT.91563120, DT.94224397, DT.94234111, DT.97376024
NIA Mouse Gene IndexU021504
Consensus CDS ProjectCCDS15077.2
International Mouse Knockout Project StatusObsl1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000016912 VEGA Gene Model | MGI Sequence Detail 27143 C57BL/6J ±  kb
transcript OTTMUST00000041038 VEGA | MGI Sequence Detail 5679 Not Applicable 
polypeptide OTTMUSP00000018383 VEGA | MGI Sequence Detail 1804 Not Applicable 

For the selected sequences
All sequences(96) RefSeq(11) UniProt(4)
Polymorphisms SNPs within 2kb(132 from dbSNP Build 137)    SNPs within 2kb including multiple locations(140)
Protein-related
information
ResourceIDDescription
InterPro IPR003961 Fibronectin, type III
InterPro IPR013098 Immunoglobulin I-set
InterPro IPR007110 Immunoglobulin-like domain
InterPro IPR013783 Immunoglobulin-like fold
InterPro IPR003599 Immunoglobulin subtype
InterPro IPR003598 Immunoglobulin subtype 2
Protein Ontology PR:000011588 obscurin-like protein 1
References (Earliest) J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
(Latest) J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
All references(26)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory