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Obsl1
Gene Detail
Symbol

Name
ID
Obsl1
obscurin-like 1
MGI:2138628
Feature Type
protein coding gene
Genetic Map
Chromosome 1
39.15 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr1:75479310-75506452 bp, - strand
From VEGA annotation of GRCm38

  27143 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HCOP human homology predictions: OBSL1
Gene Tree: Obsl1
Human
homologs
OBSL1, obscurin-like 1
Orthology source: HGNC

IDs:
NCBI Gene ID: 23363
neXtProt AC: NX_O75147

Human Chr (Location): 2q35; chr2:219549403-219571577 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human OBSL1

Mutations,
alleles, and
phenotypes
All mutations/alleles(16) : Gene trapped(14) Radiation induced(1) Spontaneous(1)
Genomic Mutations involving Obsl1 (2)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Mutations Annotated to Human Diseases (1)   
Interactions
Obsl1 interacts with 123 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Component cytoplasm, Golgi apparatus
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(72)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase obsl1    NEW 
Molecular
reagents
All nucleic(73) cDNA(73)
Microarray probesets(8)
Other database
links
VEGA Gene Model OTTMUSG00000016912 (Evidence)
Ensembl Gene Model ENSMUSG00000026211 (Evidence)
Entrez Gene 98733 (Evidence)
UniGene 236454
DFCI TC1585988, TC1582112, TC1586500, TC1684652, TC1633960, TC1623479
DoTS DT.94234111, DT.97376024, DT.94224397, DT.91563120, DT.60108228, DT.110939759, DT.489150, DT.101736828, DT.40164046, DT.101391621, DT.101736826
NIA Mouse Gene Index U021504
Consensus CDS Project CCDS15077.2
International Mouse Phenotyping Consortium Status Obsl1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000016912 VEGA Gene Model | MGI Sequence Detail 27143 C57BL/6J ±  kb
transcript OTTMUST00000041038 VEGA | MGI Sequence Detail 5679 Not Applicable 
polypeptide OTTMUSP00000018383 VEGA | MGI Sequence Detail 1804 Not Applicable 

For the selected sequences
All sequences(104) RefSeq(19) UniProt(4)
Polymorphisms
SNPs within 2kb(132 from dbSNP Build 137)    SNPs within 2kb including multiple locations(140)
Protein-related
information
ResourceIDDescription
InterPro IPR003961 Fibronectin, type III
InterPro IPR013098 Immunoglobulin I-set
InterPro IPR007110 Immunoglobulin-like domain
InterPro IPR013783 Immunoglobulin-like fold
InterPro IPR003599 Immunoglobulin subtype
InterPro IPR003598 Immunoglobulin subtype 2
Protein Ontology PR:000011588 obscurin-like protein 1
References
(Earliest) J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
(Latest) J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
All references(25)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/20/2015
MGI 5.22
The Jackson Laboratory