About   Help   FAQ
Rabif Gene Detail
Summary
  • Symbol
    Rabif
  • Name
    RAB interacting factor
  • Synonyms
    E130318E12Rik, MSS4, RASGFR3
  • Feature Type
    protein coding gene
  • IDs
    MGI:2138605
    NCBI Gene: 98710
  • Gene Overview
    MyGene.info: RABIF
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:134494660-134507885 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 58.24 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    211 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2138605
protein coding gene Chr1:134494648-134508774 (.)
129S1/SvImJ MGP_129S1SvImJ_G0016509
protein coding gene Chr1:138162771-138179422 (+)
A/J MGP_AJ_G0016492
protein coding gene Chr1:132957349-132972623 (+)
AKR/J MGP_AKRJ_G0016457
protein coding gene Chr1:136924508-136940643 (+)
BALB/cJ MGP_BALBcJ_G0016452
protein coding gene Chr1:133292196-133306312 (+)
C3H/HeJ MGP_C3HHeJ_G0016278
protein coding gene Chr1:137019794-137035936 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016913
protein coding gene Chr1:143194401-143212484 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014624
protein coding gene Chr1:126090203-126100135 (+)
CAST/EiJ MGP_CASTEiJ_G0015858
protein coding gene Chr1:136080490-136096099 (+)
CBA/J MGP_CBAJ_G0016251
protein coding gene Chr1:148144968-148163413 (+)
DBA/2J MGP_DBA2J_G0016357
protein coding gene Chr1:131968368-131983472 (+)
FVB/NJ MGP_FVBNJ_G0016356
protein coding gene Chr1:130602586-130619008 (+)
LP/J MGP_LPJ_G0016428
protein coding gene Chr1:139437895-139452043 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016381
protein coding gene Chr1:153847739-153865138 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016949
protein coding gene Chr1:136667772-136686737 (+)
PWK/PhJ MGP_PWKPhJ_G0015644
protein coding gene Chr1:130993604-131007516 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015431
protein coding gene Chr1:135627421-135643269 (+)
WSB/EiJ MGP_WSBEiJ_G0015921
protein coding gene Chr1:136687902-136702625 (+)



Homology
more
  • Human Ortholog
    RABIF, RAB interacting factor
  • Vertebrate Orthologs
    11
  • Human Ortholog
    RABIF, RAB interacting factor
    Orthology source: HomoloGene, HGNC
  • Synonyms
    MSS4, RASGFR3, RASGRF3
  • Links
    NCBI Gene ID: 5877
    neXtProt AC: NX_P47224
    UniProt: P47224

  • Chr Location
    1q32.1; chr1:202878282-202889257 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 98710 NCBI Gene Model | MGI Sequence Detail 13226 C57BL/6J ±  kb
transcript NM_145510 RefSeq | MGI Sequence Detail 2005 FVB/N  
polypeptide Q91X96 UniProt | EBI | MGI Sequence Detail 123 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 63
    cDNA 63

    Microarray probesets 6
Other
Accession IDs
less
MGI:2138336
References
more
  • Summaries
    All 37
    Gene Ontology 5
    Phenotypes 13
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/06/2018
MGI 6.13
The Jackson Laboratory