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Rabif Gene Detail
Summary
  • Symbol
    Rabif
  • Name
    RAB interacting factor
  • Synonyms
    E130318E12Rik, MSS4, RASGFR3
  • Feature Type
    protein coding gene
  • IDs
    MGI:2138605
    NCBI Gene: 98710
  • Gene Overview
    MyGene.info: RABIF
Location & Maps
more
  • Sequence Map
    Chr1:134494648-134508774 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      14127 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 58.24 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    RABIF, RAB interacting factor
  • Vertebrate Orthologs
    11
  • Human Ortholog
    RABIF, RAB interacting factor
    Orthology source: HomoloGene
  • Synonyms
    MSS4, RASGFR3, RASGRF3
  • Links
    NCBI Gene ID: 5877
    neXtProt AC: NX_P47224

  • Chr Location
    1q32.1; chr1:202878282-202889257 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
  • All Mutations and Alleles
    230
  • Chemically induced (other)
    2
  • Gene trapped
    224
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    3 involving Rabif
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000049682 VEGA Gene Model | MGI Sequence Detail 14127 C57BL/6J ±  kb
transcript OTTMUST00000126563 VEGA | MGI Sequence Detail 2861 Not Applicable  
polypeptide OTTMUSP00000068421 VEGA | MGI Sequence Detail 123 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    218 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000013655 guanine nucleotide exchange factor MSS4
  • InterPro Domains
    IPR011057 Mss4-like
    IPR011323 Mss4/translationally controlled tumour-associated TCTP
Molecular
Reagents
less
  • All nucleic 62
    cDNA 62

    Microarray probesets 6
Other
Accession IDs
less
MGI:2138336
References
more
  • Summaries
    All 32
    Gene Ontology 3
    Phenotypes 13
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/22/2016
MGI 6.04
The Jackson Laboratory