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AI597479 Gene Detail
Summary
  • Symbol
    AI597479
  • Name
    expressed sequence AI597479
  • Feature Type
    protein coding gene
  • IDs
    MGI:2138299
    NCBI Gene: 98404
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:43098710-43115946 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 22.27 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    119 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2138299
protein coding gene Chr1:43098710-43115947 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015978
protein coding gene Chr1:42065790-42083015 (+)
A/J MGP_AJ_G0015962
protein coding gene Chr1:40805507-40822731 (+)
AKR/J MGP_AKRJ_G0015917
protein coding gene Chr1:41339465-41356696 (+)
BALB/cJ MGP_BALBcJ_G0015916
protein coding gene Chr1:40480498-40497723 (+)
C3H/HeJ MGP_C3HHeJ_G0015749
protein coding gene Chr1:41720297-41737521 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016369
protein coding gene Chr1:43799433-43816655 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014091
protein coding gene Chr1:37638085-37655309 (+)
CAST/EiJ MGP_CASTEiJ_G0015330
protein coding gene Chr1:41707069-41724409 (+)
CBA/J MGP_CBAJ_G0015721
protein coding gene Chr1:45079951-45097207 (+)
DBA/2J MGP_DBA2J_G0015822
protein coding gene Chr1:40081648-40099375 (+)
FVB/NJ MGP_FVBNJ_G0015824
protein coding gene Chr1:39609446-39627066 (+)
LP/J MGP_LPJ_G0015892
protein coding gene Chr1:42411478-42430182 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015844
protein coding gene Chr1:47073096-47090349 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016416
protein coding gene Chr1:41552499-41569728 (+)
PWK/PhJ MGP_PWKPhJ_G0015113
protein coding gene Chr1:39965794-39983724 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014895
protein coding gene Chr1:41546562-41565189 (+)
WSB/EiJ MGP_WSBEiJ_G0015392
protein coding gene Chr1:41589129-41609431 (+)



Homology
more
  • Human Ortholog
    C2orf49, chromosome 2 open reading frame 49
  • Vertebrate Orthologs
    10
  • Human Ortholog
    C2orf49, chromosome 2 open reading frame 49
    Orthology source: HomoloGene, HGNC
  • Synonyms
    asw
  • Links
    NCBI Gene ID: 79074
    neXtProt AC: NX_Q9BVC5
    UniProt: Q9BVC5

  • Chr Location
    2q12.2; chr2:105337257-105359940 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 98404 NCBI Gene Model | MGI Sequence Detail 17237 C57BL/6J ±  kb
transcript NM_133818 RefSeq | MGI Sequence Detail 3476 FVB/N  
polypeptide Q922M7 UniProt | EBI | MGI Sequence Detail 232 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR024887 Ashwin
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 3
References
more
  • Summaries
    All 23
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/10/2019
MGI 6.14
The Jackson Laboratory