About   Help   FAQ
Cfhr1
Gene Detail
Symbol

Name
ID
Cfhr1
complement factor H-related 1
MGI:2138169
Synonyms
Cfhl1
Feature Type
protein coding gene
Genetic Map
Chromosome 1
61.62 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr1:139547053-139560272 bp, - strand
From VEGA annotation of GRCm38

  13220 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:55632  Vertebrate Homology Class
1 human; 1 mouse; 2 rat; 1 chimpanzee

HCOP human homology predictions: CFHR1
Gene Tree: Cfhr1

Human
homologs
CFHR1, complement factor H-related 1
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 3078
neXtProt AC: NX_Q03591

Human Synonyms: CFHL, CFHL1, CFHL1P, CFHR1P, FHR1, H36-1, H36-2, HFL1, HFL2

Human Chr (Location): 1q32; chr1:196819731-196832189 (+)  GRCh38.p2

Disease Associations: (2) Diseases Associated with Human CFHR1

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cfhr1 interacts with 116 markers (Mir7-1, Mir10a, Mir10b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component blood microparticle, extracellular exosome
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(10)
Other mouse links: GEO   Expression Atlas
Molecular
reagents
All nucleic(10) cDNA(10)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000034842 (Evidence)
Ensembl Gene Model ENSMUSG00000057037 (Evidence)
Entrez Gene 50702 (Evidence)
UniGene 220362
DFCI TC1586541
DoTS DT.495342
NIA Mouse Gene Index U021837
Consensus CDS Project CCDS15337.1
International Mouse Phenotyping Consortium Status Cfhr1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000034842 VEGA Gene Model | MGI Sequence Detail 13220 C57BL/6J ±  kb
transcript OTTMUST00000088574 VEGA | MGI Sequence Detail 1793 Not Applicable 
polypeptide OTTMUSP00000048282 VEGA | MGI Sequence Detail 343 Not Applicable 

For the selected sequences
All sequences(22) RefSeq(2) UniProt(2)
Polymorphisms
SNPs within 2kb(93 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000436 Sushi/SCR/CCP
Protein Ontology PR:000005380 complement factor H-related protein 2
References
(Earliest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(23)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/21/2015
MGI 5.22
The Jackson Laboratory