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Cfhr1 Gene Detail
Summary
  • Symbol
    Cfhr1
  • Name
    complement factor H-related 1
  • Synonyms
    Cfhl1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2138169
    NCBI Gene: 50702
  • Gene Overview
    MyGene.info: CFHR1
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:139547064-139560222 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 61.62 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    90 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2138169
protein coding gene Chr1:139547053-139560272 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016555
protein coding gene Chr1:143612269-143625412 (-)
A/J MGP_AJ_G0016538
protein coding gene Chr1:138028684-138041763 (-)
AKR/J MGP_AKRJ_G0016503
protein coding gene Chr1:142199454-142214526 (-)
BALB/cJ MGP_BALBcJ_G0016498
protein coding gene Chr1:138388404-138401458 (-)
C3H/HeJ MGP_C3HHeJ_G0016324
protein coding gene Chr1:142279364-142292504 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016959
protein coding gene Chr1:148639783-148663032 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014670
protein coding gene Chr1:131099875-131111825 (-)
CAST/EiJ MGP_CASTEiJ_G0015904
protein coding gene Chr1:141458264-141479454 (-)
CBA/J MGP_CBAJ_G0016297
protein coding gene Chr1:153776481-153789518 (-)
DBA/2J MGP_DBA2J_G0016403
protein coding gene Chr1:137030790-137047820 (-)
FVB/NJ MGP_FVBNJ_G0016402
protein coding gene Chr1:135670179-135684154 (-)
LP/J MGP_LPJ_G0016474
protein coding gene Chr1:144704063-144721441 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016427
protein coding gene Chr1:159428693-159454261 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016995
protein coding gene Chr1:141998164-142013267 (-)
PWK/PhJ MGP_PWKPhJ_G0015690
protein coding gene Chr1:136115730-136128858 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015477
protein coding gene Chr1:140937860-140954184 (-)
WSB/EiJ MGP_WSBEiJ_G0015967
protein coding gene Chr1:142001514-142015214 (-)



Homology
more
  • Human Ortholog
    CFHR1, complement factor H related 1
  • Vertebrate Orthologs
    5
  • Human Ortholog
    CFHR1, complement factor H related 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CFHL, CFHL1, CFHL1P, CFHR1P, FHR1, H36-1, H36-2, HFL1, HFL2
  • Links
    NCBI Gene ID: 3078
    neXtProt AC: NX_Q03591
    UniProt: Q03591

  • Chr Location
    1q31.3; chr1:196819730-196832189 (+)  GRCh38.p7

Human Diseases
more
  • Diseases
    2 with human CFHR1 associations

Human Disease Mouse Models
      
IDs
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 50702 NCBI Gene Model | MGI Sequence Detail 13159 C57BL/6J ±  kb
transcript NM_015780 RefSeq | MGI Sequence Detail 1732 C57BL/6  
polypeptide NP_056595 RefSeq | MGI Sequence Detail 343 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR000436 Sushi/SCR/CCP domain
    IPR035976 Sushi/SCR/CCP superfamily
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 3
References
more
  • Summaries
    All 22
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory