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Txndc9 Gene Detail
Summary
  • Symbol
    Txndc9
  • Name
    thioredoxin domain containing 9
  • Synonyms
    Apacd, ATP binding protein associated with cell differentiation
  • Feature Type
    protein coding gene
  • IDs
    MGI:2138153
    NCBI Gene: 98258
  • Gene Overview
    MyGene.info: TXNDC9
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:37985189-37997893 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 16.37 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    90 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2138153
protein coding gene Chr1:37983867-37997893 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015947
protein coding gene Chr1:36643337-36656039 (-)
A/J MGP_AJ_G0015931
protein coding gene Chr1:35632540-35645236 (-)
AKR/J MGP_AKRJ_G0015886
protein coding gene Chr1:36124023-36136868 (-)
BALB/cJ MGP_BALBcJ_G0015885
protein coding gene Chr1:35291114-35303818 (-)
C3H/HeJ MGP_C3HHeJ_G0015718
protein coding gene Chr1:36350806-36364801 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016338
protein coding gene Chr1:38232210-38245223 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014060
protein coding gene Chr1:32614487-32629002 (-)
CAST/EiJ MGP_CASTEiJ_G0015299
protein coding gene Chr1:36209124-36221823 (-)
CBA/J MGP_CBAJ_G0015690
protein coding gene Chr1:39293029-39305876 (-)
DBA/2J MGP_DBA2J_G0015791
protein coding gene Chr1:34936447-34949294 (-)
FVB/NJ MGP_FVBNJ_G0015793
protein coding gene Chr1:34465733-34478447 (-)
LP/J MGP_LPJ_G0015861
protein coding gene Chr1:36992478-37005182 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015813
protein coding gene Chr1:41442707-41455402 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016385
protein coding gene Chr1:36199575-36212277 (-)
PWK/PhJ MGP_PWKPhJ_G0015082
protein coding gene Chr1:34724317-34737390 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014864
protein coding gene Chr1:36155949-36166828 (-)
WSB/EiJ MGP_WSBEiJ_G0015361
protein coding gene Chr1:36157517-36170219 (-)



Homology
more
  • Human Ortholog
    TXNDC9, thioredoxin domain containing 9
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TXNDC9, thioredoxin domain containing 9
    Orthology source: HomoloGene, HGNC
  • Synonyms
    APACD, PHLP3
  • Links
    NCBI Gene ID: 10190
    neXtProt AC: NX_O14530
    UniProt: O14530

  • Chr Location
    2q11.2; chr2:99306184-99336397 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000058407 Ensembl Gene Model | MGI Sequence Detail 12705 C57BL/6J ±  kb
transcript ENSMUST00000162031 Ensembl | MGI Sequence Detail 3381 Not Applicable  
polypeptide ENSMUSP00000125491 Ensembl | MGI Sequence Detail 226 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 4
References
more
  • Summaries
    All 30
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory