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Txndc9 Gene Detail
Summary
  • Symbol
    Txndc9
  • Name
    thioredoxin domain containing 9
  • Synonyms
    Apacd, ATP binding protein associated with cell differentiation
  • Feature Type
    protein coding gene
  • IDs
    MGI:2138153
    NCBI Gene: 98258
  • Gene Overview
    MyGene.info: TXNDC9
Location & Maps
more
  • Sequence Map
    Chr1:37985189-37997893 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      12705 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 16.37 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    TXNDC9, thioredoxin domain containing 9
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TXNDC9, thioredoxin domain containing 9
    Orthology source: HGNC, HomoloGene
  • Synonyms
    APACD, PHLP3
  • Links
    NCBI Gene ID: 10190
    neXtProt AC: NX_O14530

  • Chr Location
    2q11.2; chr2:99319024-99336397 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    27
  • Chemically induced (other)
    1
  • Gene trapped
    22
  • Targeted
    4
  • Genomic Mutations
    1 involving Txndc9
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026595 VEGA Gene Model | MGI Sequence Detail 12705 C57BL/6J ±  kb
transcript OTTMUST00000065804 VEGA | MGI Sequence Detail 3381 Not Applicable  
polypeptide OTTMUSP00000032845 VEGA | MGI Sequence Detail 226 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    90 from dbSNP Build 142
Protein
Information
less
  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000016866 thioredoxin domain-containing protein 9
  • InterPro Domains
    IPR013766 Thioredoxin domain
    IPR012336 Thioredoxin-like fold
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 4
References
more
  • Summaries
    All 29
    Gene Ontology 5
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/12/2016
MGI 6.04
The Jackson Laboratory