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Prcc
Gene Detail
Symbol

Name
ID
Prcc
papillary renal cell carcinoma (translocation-associated)
MGI:2137738
Feature Type
protein coding gene
Genetic Map
Chromosome 3
38.78 cM, cytoband F2.1-2.2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr3:87858900-87885608 bp, - strand
From VEGA annotation of GRCm38

  26709 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:38120  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Prcc

Human
homologs
Human Homolog PRCC, papillary renal cell carcinoma (translocation-associated)
NCBI Gene ID 5546
neXtProt AC  NX_Q92733
Human Synonyms  RCCP1, TPRC
Human Chr (Location)  1q21.1; chr1:156767482-156800817 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human PRCC
Mutations,
alleles, and
phenotypes
All mutations/alleles(35) : Gene trapped(33) Targeted(2)
Incidental mutations (data from APF )
Interactions
Prcc interacts with 78 markers (Mir15a, Mir15b, Mir16-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process mitotic cell cycle checkpoint
Component intracellular membrane-bounded organelle, nucleus
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (11)    Tissues (11)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 1
Northern blot 10
cDNA source data(24)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(25) Genomic(1) cDNA(24)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000030643 (Evidence)
Ensembl Gene ModelENSMUSG00000004895 (Evidence)
Entrez Gene94315 (Evidence)
UniGene35089
DFCITC1581889
DoTSDT.60118008
NIA Mouse Gene IndexU024236
Consensus CDS ProjectCCDS17456.1
International Mouse Knockout Project StatusPrcc
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000030643 VEGA Gene Model | MGI Sequence Detail 26709 C57BL/6J ±  kb
transcript OTTMUST00000075865 VEGA | MGI Sequence Detail 2102 Not Applicable 
polypeptide OTTMUSP00000039842 VEGA | MGI Sequence Detail 491 Not Applicable 

For the selected sequences
All sequences(25) RefSeq(4) UniProt(2)
Polymorphisms
SNPs within 2kb(78 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018800 Mitotic checkpoint protein PRCC, C-terminal
Protein Ontology PR:000013177 proline-rich protein PRCC
References
(Earliest) J:70457 Weterman MA, et al., Genomic structure, chromosomal localization, and embryonic expression of the mouse homolog of PRCC, a gene associated with papillary renal cell carcinoma. Cytogenet Cell Genet. 2001;92(3-4):326-32
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory