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Prcc
Gene Detail
Symbol

Name
ID
Prcc
papillary renal cell carcinoma (translocation-associated)
MGI:2137738
Feature Type
protein coding gene
Genetic Map
Chromosome 3
38.78 cM, cytoband F2.1-2.2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr3:87858903-87885608 bp, - strand
From VEGA annotation of GRCm38

  26706 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:38120  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: PRCC
Gene Tree: Prcc

Human
homologs
PRCC, papillary renal cell carcinoma (translocation-associated)
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 5546
neXtProt AC: NX_Q92733

Human Synonyms: RCCP1, TPRC

Human Chr (Location): 1q21.1; chr1:156767482-156800817 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human PRCC

Mutations,
alleles, and
phenotypes
All mutations/alleles(35) : Gene trapped(33) Targeted(2)
Incidental mutations (data from APF )
Interactions
Prcc interacts with 78 markers (Mir15a, Mir15b, Mir16-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process mitotic cell cycle checkpoint
Component intracellular membrane-bounded organelle, nucleoplasm, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (11)    Tissues (11)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 1
Northern blot 10
cDNA source data(24)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase prcc    NEW 
Molecular
reagents
All nucleic(25) Genomic(1) cDNA(24)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000030643 (Evidence)
Ensembl Gene Model ENSMUSG00000004895 (Evidence)
Entrez Gene 94315 (Evidence)
UniGene 35089
DFCI TC1581889
DoTS DT.60118008
NIA Mouse Gene Index U024236
Consensus CDS Project CCDS17456.1
International Mouse Phenotyping Consortium Status Prcc
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000030643 VEGA Gene Model | MGI Sequence Detail 26706 C57BL/6J ±  kb
transcript OTTMUST00000075865 VEGA | MGI Sequence Detail 2099 Not Applicable 
polypeptide OTTMUSP00000039842 VEGA | MGI Sequence Detail 491 Not Applicable 

For the selected sequences
All sequences(23) RefSeq(2) UniProt(2)
Polymorphisms
SNPs within 2kb(78 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018800 Mitotic checkpoint protein PRCC, C-terminal
Protein Ontology PR:000013177 proline-rich protein PRCC
References
(Earliest) J:70457 Weterman MA, et al., Genomic structure, chromosomal localization, and embryonic expression of the mouse homolog of PRCC, a gene associated with papillary renal cell carcinoma. Cytogenet Cell Genet. 2001;92(3-4):326-32
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory