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Trim11 Gene Detail
Summary
  • Symbol
    Trim11
  • Name
    tripartite motif-containing 11
  • Feature Type
    protein coding gene
  • IDs
    MGI:2137355
    NCBI Gene: 94091
  • Gene Overview
    MyGene.info: TRIM11
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:58978093-58991458 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 36.40 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    206 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2137355
protein coding gene Chr11:58978075-58991462 (.)
129S1/SvImJ MGP_129S1SvImJ_G0018386
protein coding gene Chr11:58760014-58773143 (+)
A/J MGP_AJ_G0018355
protein coding gene Chr11:56519500-56534096 (+)
AKR/J MGP_AKRJ_G0018325
protein coding gene Chr11:58420155-58433305 (+)
BALB/cJ MGP_BALBcJ_G0018326
protein coding gene Chr11:56888771-56901904 (+)
C3H/HeJ MGP_C3HHeJ_G0018139
protein coding gene Chr11:58315248-58328551 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018778
protein coding gene Chr11:60635906-60649076 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016423
protein coding gene Chr11:53792460-53806273 (+)
CAST/EiJ MGP_CASTEiJ_G0017697
protein coding gene Chr11:58424753-58438081 (+)
CBA/J MGP_CBAJ_G0018113
protein coding gene Chr11:63280794-63294171 (+)
DBA/2J MGP_DBA2J_G0018222
protein coding gene Chr11:56197717-56211022 (+)
FVB/NJ MGP_FVBNJ_G0018213
protein coding gene Chr11:55845325-55858634 (+)
LP/J MGP_LPJ_G0018295
protein coding gene Chr11:59375700-59388839 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018237
protein coding gene Chr11:64436585-64450692 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018819
protein coding gene Chr11:58426663-58439792 (+)
PWK/PhJ MGP_PWKPhJ_G0017467
protein coding gene Chr11:56782709-56796396 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017260
protein coding gene Chr11:58232891-58246018 (+)
WSB/EiJ MGP_WSBEiJ_G0017747
protein coding gene Chr11:58111072-58124245 (+)



Homology
more
  • Human Ortholog
    TRIM11, tripartite motif containing 11
  • Vertebrate Orthologs
    6
  • Human Ortholog
    TRIM11, tripartite motif containing 11
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BIA1, RNF92
  • Links
    NCBI Gene ID: 81559
    neXtProt AC: NX_Q96F44
    UniProt: Q96F44

  • Chr Location
    1q42.13; chr1:228393672-228406883 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020455 Ensembl Gene Model | MGI Sequence Detail 13366 C57BL/6J ±  kb
transcript ENSMUST00000108810 Ensembl | MGI Sequence Detail 2301 Not Applicable  
polypeptide ENSMUSP00000104438 Ensembl | MGI Sequence Detail 483 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 87
    cDNA 87

    Microarray probesets 3
References
more
  • Summaries
    All 35
    Developmental Gene Expression 5
    Gene Ontology 8
    Phenotypes 5
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:238965 Liu T, et al., TRIM11 Suppresses AIM2 Inflammasome by Degrading AIM2 via p62-Dependent Selective Autophagy. Cell Rep. 2016 Aug 16;16(7):1988-2002

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory