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Cecr6
Gene Detail
Symbol

Name
ID
Cecr6
cat eye syndrome chromosome region, candidate 6
MGI:2136977
Feature Type
protein coding gene
Genetic Map
Chromosome 6
56.95 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr6:120488939-120493807 bp, - strand
From NCBI annotation of GRCm38

  4869 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12893  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: CECR6
Gene Tree: Cecr6

Human
homologs
CECR6, cat eye syndrome chromosome region, candidate 6
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 27439
neXtProt AC: NX_Q9BXQ6

Human Chr (Location): 22q11.2; chr22:17116299-17121367 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
Incidental mutations (data from APF )
Interactions
Cecr6 interacts with 293 markers (Mir1a-1, Mir1a-2, Mir10a, ...)
Expression
cDNA source data(17)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(17) cDNA(17)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000094626 (Evidence)
Entrez Gene 94047 (Evidence)
UniGene 23088
DFCI TC1584901
DoTS DT.521941
NIA Mouse Gene Index U027807
Consensus CDS Project CCDS57446.1
International Mouse Phenotyping Consortium Status Cecr6
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 94047 NCBI Gene Model | MGI Sequence Detail 4869 C57BL/6J ±  kb
transcript NM_033567 RefSeq | MGI Sequence Detail 4885 Not Specified 
polypeptide Q99MX7 UniProt | EBI | MGI Sequence Detail 572 Not Applicable 

For the selected sequences
All sequences(18) RefSeq(2) UniProt(3)
Polymorphisms
SNPs within 2kb(10 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR026624 Cat eye syndrome critical region protein 6
Protein Ontology PR:000005316 cat eye syndrome critical region protein 6
Graphical View of Protein Domain Structure
References
(Earliest) J:69974 Footz TK, et al., Analysis of the Cat Eye Syndrome Critical Region in Humans and the Region of Conserved Synteny in Mice: A Search for Candidate Genes at or near the Human Chromosome 22 Pericentromere. Genome Res. 2001 Jun;11(6):1053-70
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(21)
Other
accession IDs
MGI:2141636

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory