About   Help   FAQ
Cecr5 Gene Detail
Summary
  • Symbol
    Cecr5
  • Name
    cat eye syndrome chromosome region, candidate 5
  • Synonyms
    A930002G03Rik, MGC:25951
  • Feature Type
    protein coding gene
  • IDs
    MGI:2136976
    NCBI Gene: 214932
Location & Maps
more
  • Sequence Map
    Chr6:120509494-120531319 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      21826 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 56.95 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CECR5, cat eye syndrome chromosome region, candidate 5
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CECR5, cat eye syndrome chromosome region, candidate 5
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 27440
    neXtProt AC: NX_Q9BXW7

  • Chr Location
    22q11.2; chr22:17137520-17165287 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 32816
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed
  • HCOP
    human homology predictions: CECR5
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    1
  • Targeted
    1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022665 VEGA Gene Model | MGI Sequence Detail 21826 C57BL/6J ±  kb
transcript OTTMUST00000054304 VEGA | MGI Sequence Detail 1928 Not Applicable  
polypeptide OTTMUSP00000025905 VEGA | MGI Sequence Detail 419 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    154 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000005315 cat eye syndrome critical region protein 5
  • InterPro Domains
    IPR029621 Cat eye syndrome critical region protein 5
    IPR023214 HAD-like domain
    IPR006357 HAD-superfamily hydrolase, subfamily IIA
    IPR006353 HAD-superfamily hydrolase, subfamily IIA, CECR5
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 4
Other
Accession IDs
less
MGI:2442556
References
more
  • Summaries
    All 25
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:69974 Footz TK, et al., Analysis of the Cat Eye Syndrome Critical Region in Humans and the Region of Conserved Synteny in Mice: A Search for Candidate Genes at or near the Human Chromosome 22 Pericentromere. Genome Res. 2001 Jun;11(6):1053-70
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/20/2016
MGI 6.05
The Jackson Laboratory