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B3galt5 Gene Detail
Summary
  • Symbol
    B3galt5
  • Name
    UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
  • Synonyms
    1190002B21Rik, b3Galt-V
  • Feature Type
    protein coding gene
  • IDs
    MGI:2136878
    NCBI Gene: 93961
  • Gene Overview
    MyGene.info: B3GALT5
Location & Maps
more
  • Sequence Map
    Chr16:96235801-96319859 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      84059 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 56.88 cM
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    B3GALT5, beta-1,3-galactosyltransferase 5
  • Vertebrate Orthologs
    14
  • Human Ortholog
    B3GALT5, beta-1,3-galactosyltransferase 5
    Orthology source: HomoloGene, HGNC
  • Synonyms
    B3GalT-V, B3GalTx, B3T5, beta-1,3-GalTase 5, beta3Gal-T5, beta-3-Gx-T5, GLCT5
  • Links
    NCBI Gene ID: 10317
    neXtProt AC: NX_Q9Y2C3

  • Chr Location
    21q22.3; chr21:39612940-39662889 (+)  GRCh38.p2
Human Diseases
less
  • References
    3 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    20 phenotype references
  • All Mutations and Alleles
    6
  • Targeted
    6
  • Genomic Mutations
    5 involving B3galt5
  • Incidental Mutations
    APF
Homozygous mice for a targeted mutation appear normal.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    47
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    250
  • Tissues
    183
  • cDNA Data
    18
  • Literature Summary
    5
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000020397 VEGA Gene Model | MGI Sequence Detail 84059 C57BL/6J ±  kb
transcript OTTMUST00000048370 VEGA | MGI Sequence Detail 5282 Not Applicable  
polypeptide OTTMUSP00000022150 VEGA | MGI Sequence Detail 308 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    401 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000004586 beta-1,3-galactosyltransferase 5
  • EC
    2.4.1.-
  • InterPro Domains
    IPR002659 Glycosyl transferase, family 31
    IPR029044 Nucleotide-diphospho-sugar transferases
Molecular
Reagents
less
  • All nucleic 22
    cDNA 18
    Primer pair 4

    Microarray probesets 6
Other
Accession IDs
less
MGI:1916121, MGI:2146583
References
more
  • Summaries
    All 31
    Developmental Gene Expression 5
    Diseases 3
    Gene Ontology 4
    Phenotypes 20
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/13/2016
MGI 6.05 		The Jackson Laboratory