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Cd96 Gene Detail
Summary
  • Symbol
    Cd96
  • Name
    CD96 antigen
  • Synonyms
    1700109I12Rik, Tactile
  • Feature Type
    protein coding gene
  • IDs
    MGI:1934368
    NCBI Gene: 84544
  • Alliance
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:46035657-46120251 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 30.45 cM, cytoband B5
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    755 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1934368
protein coding gene Chr16:46035652-46120251 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022861
protein coding gene Chr16:44848086-44931705 (-)
A/J MGP_AJ_G0022826
protein coding gene Chr16:42845178-42929924 (-)
AKR/J MGP_AKRJ_G0022798
protein coding gene Chr16:44241739-44320565 (-)
BALB/cJ MGP_BALBcJ_G0022827
protein coding gene Chr16:42863278-42945862 (-)
C3H/HeJ MGP_C3HHeJ_G0022591
protein coding gene Chr16:44401102-44481057 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023274
protein coding gene Chr16:45864899-45949040 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020788
protein coding gene Chr16:43197710-43282458 (-)
CAST/EiJ MGP_CASTEiJ_G0022116
protein coding gene Chr16:44605487-44684644 (-)
CBA/J MGP_CBAJ_G0022562
protein coding gene Chr16:47781280-47868090 (-)
DBA/2J MGP_DBA2J_G0022694
protein coding gene Chr16:42574638-42657908 (-)
FVB/NJ MGP_FVBNJ_G0022670
protein coding gene Chr16:42488555-42574827 (-)
LP/J MGP_LPJ_G0022762
protein coding gene Chr16:44599031-44688386 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022688
protein coding gene Chr16:47187824-47276072 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023289
protein coding gene Chr16:44258690-44342434 (-)
PWK/PhJ MGP_PWKPhJ_G0021856
protein coding gene Chr16:42949488-43028269 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021687
protein coding gene Chr16:44185926-44269398 (-)
WSB/EiJ MGP_WSBEiJ_G0022161
protein coding gene Chr16:44355544-44436994 (-)



Homology
more
  • Human Ortholog
    CD96, CD96 molecule
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CD96, CD96 molecule
    Orthology source: HomoloGene, HGNC
  • Synonyms
    TACTILE
  • Links
    NCBI Gene ID: 10225
    neXtProt AC: NX_P40200
    UniProt: P40200

  • Chr Location
    3q13.13-q13.2; chr3:111542079-111665996 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022657 Ensembl Gene Model | MGI Sequence Detail 84595 C57BL/6J ±  kb
transcript ENSMUST00000023336 Ensembl | MGI Sequence Detail 2184 Not Applicable  
polypeptide ENSMUSP00000023336 Ensembl | MGI Sequence Detail 602 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 23
    cDNA 22
    Other 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1920816
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:261084 Stanko K, et al., CD96 expression determines the inflammatory potential of IL-9-producing Th9 cells. Proc Natl Acad Sci U S A. 2018 Mar 27;115(13):E2940-E2949

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory