About   Help   FAQ
Syt13 Gene Detail
Summary
  • Symbol
    Syt13
  • Name
    synaptotagmin XIII
  • Synonyms
    5730409J20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1933945
    NCBI Gene: 80976
  • Gene Overview
    MyGene.info: SYT13
Location & Maps
more
  • Sequence Map
    Chr2:92915098-92956058 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      40961 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 51.37 cM, cytoband E1
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    SYT13, synaptotagmin 13
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SYT13, synaptotagmin 13
    Orthology source: HomoloGene
  • Links
    NCBI Gene ID: 57586
    neXtProt AC: NX_Q7L8C5

  • Chr Location
    11p11.2; chr11:45240302-45286333 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    9
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Radiation induced
    1
  • Targeted
    5
  • Genomic Mutations
    4 involving Syt13
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014492 VEGA Gene Model | MGI Sequence Detail 40961 C57BL/6J ±  kb
transcript OTTMUST00000034415 VEGA | MGI Sequence Detail 3761 Not Applicable  
polypeptide OTTMUSP00000015416 VEGA | MGI Sequence Detail 426 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    275 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 55
    cDNA 51
    Primer pair 3
    Other 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1917750, MGI:2139000
References
more
  • Summaries
    All 35
    Developmental Gene Expression 8
    Gene Ontology 4
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/19/2016
MGI 6.04
The Jackson Laboratory