Zfp202
Gene Detail

Symbol Name ID

Zfp202 zinc finger protein 202 MGI:1933401

Synonyms

C130037E22Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 9

21.42 cM, cytoband B
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr9:40192316-40213604 bp, + strand From VEGA annotation of GRCm38   21289 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:68317  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Zfp202

Human homologs

Human Homolog		ZNF202, zinc finger protein 202
NCBI Gene ID		7753
neXtProt AC		NX_O95125
Human Synonyms		ZKSCAN10, ZSCAN42
Human Chr (Location)		11q23.3; chr11:123594997-123612363 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(8) : Targeted(4) Gene trapped(4)

Gene Ontology (GO) classifications

All GO classifications: (5 annotations)

Process	regulation of transcription, DNA-dependent, transcription, DNA-dependent
Component	nucleus
Function	metal ion binding, sequence-specific DNA binding RNA polymerase II transcription factor activity

External Resources: FuncBase

Expression

Literature Summary: (4 records)
Data Summary: Results (54)    Tissues (43)    Images (3)
Theiler Stages: 2, 3, 4, 5, 21, 23, 28

Assay Type	Results
RNA in situ	39
RT-PCR	15

cDNA source data(15)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(16) cDNA(15) Primer pair(1)
Microarray probesets(2)

Other database links

VEGA Gene Model	OTTMUSG00000035370 (Evidence)
Ensembl Gene Model	ENSMUSG00000025602 (Evidence)
Entrez Gene	80902 (Evidence)
UniGene	132196
DFCI	TC1584335, TC1663898
DoTS	DT.101714730, DT.110571795, DT.91338186
Consensus CDS Project	CCDS23079.1
International Mouse Knockout Project Status	Zfp202

Sequences

Length	Strain/Species
genomic	OTTMUSG00000035370	VEGA Gene Model | MGI Sequence Detail	21289	C57BL/6J
transcript	OTTMUST00000090368	VEGA | MGI Sequence Detail	3461	Not Applicable
polypeptide	OTTMUSP00000049558	VEGA | MGI Sequence Detail	641	Not Applicable

All sequences(34) RefSeq(2) UniProt(4)

Polymorphisms

SNPs(112 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR001909	Krueppel-associated box
InterPro	IPR008916	Retrovirus capsid, C-terminal
InterPro	IPR003309	Transcription regulator SCAN
InterPro	IPR007087	Zinc finger, C2H2
InterPro	IPR015880	Zinc finger, C2H2-like
InterPro	IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain
Protein Ontology	PR:000017746	zinc finger protein 202

References

(Earliest) J:67567 Honer C, et al., Identification of SCAN dimerization domains in four gene families. Biochim Biophys Acta. 2001 Feb 16;1517(3):441-8
(Latest) J:140465 Guo G, et al., Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. Dev Cell. 2010 Apr 20;18(4):675-85
All references(37)

Other accession IDs

MGI:2443865