About   Help   FAQ
Zfp202
Gene Detail
Symbol

Name
ID
Zfp202
zinc finger protein 202
MGI:1933401
Synonyms
C130037E22Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 9
21.42 cM, cytoband B
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr9:40192316-40213604 bp, + strand
From VEGA annotation of GRCm38

  21289 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:68317  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Zfp202

Human
homologs
Human Homolog ZNF202, zinc finger protein 202
NCBI Gene ID 7753
neXtProt AC  NX_O95125
Human Synonyms  ZKSCAN10, ZSCAN42
Human Chr (Location)  11q24; chr11:123724289-123741675 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Gene trapped(4) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Zfp202 interacts with 336 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process regulation of transcription, DNA-templated, regulation of transcription from RNA polymerase II promoter, ...
Component nucleus
Function DNA binding, metal ion binding, ...
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (47)    Tissues (38)    Images (3)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 39
RT-PCR 8
cDNA source data(15)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(16) cDNA(15) Primer pair(1)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000035370 (Evidence)
Ensembl Gene ModelENSMUSG00000025602 (Evidence)
Entrez Gene80902 (Evidence)
UniGene132196
DFCITC1584335, TC1663898
DoTSDT.101714730, DT.110571795, DT.91338186
Consensus CDS ProjectCCDS23079.1
International Mouse Knockout Project StatusZfp202
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000035370 VEGA Gene Model | MGI Sequence Detail 21289 C57BL/6J ±  kb
transcript OTTMUST00000090368 VEGA | MGI Sequence Detail 3461 Not Applicable 
polypeptide OTTMUSP00000049558 VEGA | MGI Sequence Detail 641 Not Applicable 

For the selected sequences
All sequences(44) RefSeq(8) UniProt(8)
Polymorphisms
SNPs within 2kb(216 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001909 Krueppel-associated box
InterPro IPR008916 Retrovirus capsid, C-terminal
InterPro IPR003309 Transcription regulator SCAN
InterPro IPR007087 Zinc finger, C2H2
InterPro IPR015880 Zinc finger, C2H2-like
InterPro IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Protein Ontology PR:000017746 zinc finger protein 202
References
(Earliest) J:67567 Honer C, et al., Identification of SCAN dimerization domains in four gene families. Biochim Biophys Acta. 2001 Feb 16;1517(3):441-8
(Latest) J:197169 Vrins CL, et al., Znf202 affects high density lipoprotein cholesterol levels and promotes hepatosteatosis in hyperlipidemic mice. PLoS One. 2013;8(2):e57492
All references(37)
Other
accession IDs
MGI:2443865

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/21/2014
MGI 5.20
The Jackson Laboratory