About   Help   FAQ
Sytl3 Gene Detail
Summary
  • Symbol
    Sytl3
  • Name
    synaptotagmin-like 3
  • Synonyms
    Slp3, Slp3-a, Slp3-b
  • Feature Type
    protein coding gene
  • IDs
    MGI:1933367
    NCBI Gene: 83672
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:6659093-6738044 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 4.33 cM, cytoband A1
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    249 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1933367
protein coding gene Chr17:6658234-6738070 (.)
129S1/SvImJ MGP_129S1SvImJ_G0023116
protein coding gene Chr17:3907626-3982081 (+)
A/J no annotation
AKR/J MGP_AKRJ_G0023051
protein coding gene Chr17:4025436-4035215 (+)
BALB/cJ MGP_BALBcJ_G0023087
protein coding gene Chr17:3798619-3833118 (+)
C3H/HeJ MGP_C3HHeJ_G0022846
protein coding gene Chr17:3604105-4135433 (+)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0021033
protein coding gene Chr17:3203287-3267955 (+)
CAST/EiJ MGP_CASTEiJ_G0022363
protein coding gene Chr17:4047593-4089196 (+)
CBA/J MGP_CBAJ_G0022814
protein coding gene Chr17:4267086-4276485 (+)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0022925
protein coding gene Chr17:3665867-3740824 (+)
LP/J MGP_LPJ_G0023019
protein coding gene Chr17:4047401-4058779 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022943
protein coding gene Chr17:4156430-4165744 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023554
protein coding gene Chr17:4011027-4022164 (+)
PWK/PhJ MGP_PWKPhJ_G0022110
protein coding gene Chr17:3616730-3686301 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021936
protein coding gene Chr17:3648091-3679553 (+)
WSB/EiJ MGP_WSBEiJ_G0022417
protein coding gene Chr17:3869237-4086771 (+)



Homology
more
  • Human Ortholog
    SYTL3, synaptotagmin like 3
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SYTL3, synaptotagmin like 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    SLP3
  • Links
    NCBI Gene ID: 94120
    neXtProt AC: NX_Q4VX76
    UniProt: Q4VX76

  • Chr Location
    6q25.3; chr6:158644881-158766298 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000041831 Ensembl Gene Model | MGI Sequence Detail 78952 C57BL/6J ±  kb
transcript ENSMUST00000097430 Ensembl | MGI Sequence Detail 2423 Not Applicable  
polypeptide ENSMUSP00000095041 Ensembl | MGI Sequence Detail 607 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 13
    Primer pair 4

    Microarray probesets 3
References
more
  • Summaries
    All 24
    Developmental Gene Expression 3
    Gene Ontology 6
    Phenotypes 2
  • Earliest
    J:68115 Fukuda M, et al., Synaptotagmin-like protein 1-3: a novel family of c-terminal-type tandem c2 proteins. Biochem Biophys Res Commun. 2001 Mar 16;281(5):1226-33
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/06/2018
MGI 6.13
The Jackson Laboratory