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Ctps2 Gene Detail
Summary
  • Symbol
    Ctps2
  • Name
    cytidine 5'-triphosphate synthase 2
  • Synonyms
    A830031M15Rik, CTPsH
  • Feature Type
    protein coding gene
  • IDs
    MGI:1933185
    NCBI Gene: 55936
  • Gene Overview
    MyGene.info: CTPS2
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:162901238-163032508 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 75.09 cM, cytoband F5
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    368 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1933185
protein coding gene ChrX:162901238-163034541 (.)
129S1/SvImJ MGP_129S1SvImJ_G0036243
protein coding gene ChrX:160929357-161065593 (+)
A/J MGP_AJ_G0036213
protein coding gene ChrX:160136735-160270021 (+)
AKR/J MGP_AKRJ_G0036141
protein coding gene ChrX:165255582-165388870 (+)
BALB/cJ MGP_BALBcJ_G0036206
protein coding gene ChrX:158142121-158269173 (+)
C3H/HeJ MGP_C3HHeJ_G0035912
protein coding gene ChrX:161292599-161431760 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036728
protein coding gene ChrX:165668281-165802946 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033550
protein coding gene ChrX:151222021-151353844 (+)
CAST/EiJ MGP_CASTEiJ_G0035201
protein coding gene ChrX:140275701-140408233 (+)
CBA/J MGP_CBAJ_G0035887
protein coding gene ChrX:170426279-170607243 (+)
DBA/2J MGP_DBA2J_G0036053
protein coding gene ChrX:159043458-159177802 (+)
FVB/NJ MGP_FVBNJ_G0035984
protein coding gene ChrX:158178321-158313834 (+)
LP/J MGP_LPJ_G0036138
protein coding gene ChrX:162106756-162240060 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0036016
protein coding gene ChrX:179116635-179262058 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036769
protein coding gene ChrX:160433626-160565922 (+)
PWK/PhJ MGP_PWKPhJ_G0034899
protein coding gene ChrX:137084378-137215655 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034720
protein coding gene ChrX:140744331-140875533 (+)
WSB/EiJ MGP_WSBEiJ_G0035336
protein coding gene ChrX:158403678-158535416 (+)



Homology
more
  • Human Ortholog
    CTPS2, CTP synthase 2
  • Vertebrate Orthologs
    8
  • Human Ortholog
    CTPS2, CTP synthase 2
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 56474
    neXtProt AC: NX_Q9NRF8
    UniProt: Q9NRF8

  • Chr Location
    Xp22.2; chrX:16587999-16712979 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    4 images
    11 phenotype references
Male chimeras hemizygous for a gene trapped allele appear normal at E9.5.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031360 Ensembl Gene Model | MGI Sequence Detail 131271 C57BL/6J ±  kb
transcript ENSMUST00000112301 Ensembl | MGI Sequence Detail 3099 Not Applicable  
polypeptide ENSMUSP00000107920 Ensembl | MGI Sequence Detail 586 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 99
    cDNA 99

    Microarray probesets 8
Other
Accession IDs
less
MGI:2147879
References
more
  • Summaries
    All 42
    Developmental Gene Expression 3
    Gene Ontology 6
    Phenotypes 11
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory