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Rnf114
Gene Detail
 Symbol
Name
ID
Rnf114
ring finger protein 114
MGI:1933159
Synonyms 1110008J21Rik, Zfp313, Znf228
Feature Type protein coding gene
Genetic Map
Chromosome 2
87.25 cM, cytoband H3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr2:167492645-167516173 bp, + strand
From VEGA annotation of GRCm38

  23529 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:10265  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Rnf114

Human
homologs
Human Homolog RNF114, ring finger protein 114
NCBI Gene ID 55905
neXtProt AC  NX_Q9Y508
Human Synonyms  PSORS12, ZNF313
Human Chr (Location)  20q13.13; chr20:49936377-49953885 (+)  GRCh38
Alleles
and
phenotypes
All alleles(10) : Gene trapped(9) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (19 annotations)
Process cell differentiation, multicellular organismal development, ...
Component cytoplasm, intracellular, ...
Function coenzyme F420-0 gamma-glutamyl ligase activity, coenzyme F420-2 alpha-glutamyl ligase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (107)    Tissues (61)    Images (7)
Theiler Stages: 2, 3, 4, 5, 16, 17, 21, 23, 27, 28
Assay TypeResults
RNA in situ 56
RT-PCR 51
cDNA source data(253)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(255) cDNA(253) Primer pair(2)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000001140 (Evidence)
Ensembl Gene ModelENSMUSG00000006418 (Evidence)
Entrez Gene81018 (Evidence)
UniGene22225
DFCITC1573095, TC1613477
DoTSDT.101379090, DT.101379095, DT.103575665, DT.494801, DT.94198586, DT.97342821, DT.99868710
NIA Mouse Gene IndexU002850
EC6.3.2.-
Consensus CDS ProjectCCDS17101.1
International Mouse Knockout Project StatusRnf114
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000001140 VEGA Gene Model | MGI Sequence Detail 23529 C57BL/6J ±  kb
transcript OTTMUST00000038920 VEGA | MGI Sequence Detail 3001 Not Applicable 
polypeptide OTTMUSP00000017392 VEGA | MGI Sequence Detail 229 Not Applicable 

For the selected sequences
All sequences(75) RefSeq(4) UniProt(4)
Polymorphisms SNPs within 2kb(149 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR008598 Drought induced 19/ RING finger protein 114
InterPro IPR015880 Zinc finger, C2H2-like
InterPro IPR013083 Zinc finger, RING/FYVE/PHD-type
InterPro IPR001841 Zinc finger, RING-type
InterPro IPR017907 Zinc finger, RING-type, conserved site
Protein Ontology PR:000014071 RING finger protein 114
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:174767 Tang F, et al., Deterministic and stochastic allele specific gene expression in single mouse blastomeres. PLoS One. 2011;6(6):e21208
All references(41)
Other
accession IDs
MGI:1920985, MGI:2138866, MGI:2139384

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory