About   Help   FAQ
Rnf114
Gene Detail
Symbol

Name
ID
Rnf114
ring finger protein 114
MGI:1933159
Synonyms
1110008J21Rik, Zfp313, Znf228
Feature Type
protein coding gene
Genetic Map
Chromosome 2
87.25 cM, cytoband H3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr2:167492645-167516173 bp, + strand
From VEGA annotation of GRCm38

  23529 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:10265  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: RNF114
Gene Tree: Rnf114

Human
homologs
RNF114, ring finger protein 114
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 55905
neXtProt AC: NX_Q9Y508

Human Synonyms: PSORS12, ZNF313

Human Chr (Location): 20q13.13; chr20:49936377-49953885 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(10) : Gene trapped(9) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Rnf114 interacts with 190 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (4 records)
Data Summary: Results (100)    Tissues (57)    Images (7)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 56
RT-PCR 44
cDNA source data(253)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase rnf114 ; ZFIN rnf114    NEW 
Molecular
reagents
All nucleic(255) cDNA(253) Primer pair(2)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000001140 (Evidence)
Ensembl Gene Model ENSMUSG00000006418 (Evidence)
Entrez Gene 81018 (Evidence)
UniGene 22225
DFCI TC1573095, TC1613477
DoTS DT.101379090, DT.101379095, DT.103575665, DT.494801, DT.94198586, DT.97342821, DT.99868710
NIA Mouse Gene Index U002850
EC 6.3.2.-
Consensus CDS Project CCDS17101.1
International Mouse Phenotyping Consortium Status Rnf114
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000001140 VEGA Gene Model | MGI Sequence Detail 23529 C57BL/6J ±  kb
transcript OTTMUST00000038920 VEGA | MGI Sequence Detail 3001 Not Applicable 
polypeptide OTTMUSP00000017392 VEGA | MGI Sequence Detail 229 Not Applicable 

For the selected sequences
All sequences(76) RefSeq(4) UniProt(4)
Polymorphisms
SNPs within 2kb(149 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR008598 Drought induced 19/ RING finger protein 114
InterPro IPR015880 Zinc finger, C2H2-like
InterPro IPR013083 Zinc finger, RING/FYVE/PHD-type
InterPro IPR001841 Zinc finger, RING-type
InterPro IPR017907 Zinc finger, RING-type, conserved site
Protein Ontology PR:000014071 RING finger protein 114
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:174767 Tang F, et al., Deterministic and stochastic allele specific gene expression in single mouse blastomeres. PLoS One. 2011;6(6):e21208
All references(39)
Other
accession IDs
MGI:1920985, MGI:2138866, MGI:2139384

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/18/2015
MGI 6.0
The Jackson Laboratory