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Abtb1 Gene Detail
Summary
  • Symbol
    Abtb1
  • Name
    ankyrin repeat and BTB (POZ) domain containing 1
  • Synonyms
    BPOZ, EF1ABP, MGC:7237
  • Feature Type
    protein coding gene
  • IDs
    MGI:1933148
    NCBI Gene: 80283
  • Gene Overview
    MyGene.info: ABTB1
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:88835914-88841984 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 39.60 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    23 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1933148
protein coding gene Chr6:88835914-88842375 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031014
protein coding gene Chr6:90249827-90255897 (-)
A/J MGP_AJ_G0030980
protein coding gene Chr6:86781140-86787210 (-)
AKR/J MGP_AKRJ_G0030911
protein coding gene Chr6:89258482-89264552 (-)
BALB/cJ MGP_BALBcJ_G0030993
protein coding gene Chr6:86768718-86774788 (-)
C3H/HeJ MGP_C3HHeJ_G0030717
protein coding gene Chr6:95177393-95183463 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031450
protein coding gene Chr6:92666729-92672799 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028632
protein coding gene Chr6:84932701-84938815 (-)
CAST/EiJ MGP_CASTEiJ_G0030102
protein coding gene Chr6:89376680-89382748 (-)
CBA/J MGP_CBAJ_G0030677
protein coding gene Chr6:96209561-96215631 (-)
DBA/2J MGP_DBA2J_G0030833
protein coding gene Chr6:86060579-86066649 (-)
FVB/NJ MGP_FVBNJ_G0030786
protein coding gene Chr6:85254323-85260393 (-)
LP/J MGP_LPJ_G0030910
protein coding gene Chr6:90275969-90282039 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030819
protein coding gene Chr6:100316226-100322296 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031477
protein coding gene Chr6:89123191-89129261 (-)
PWK/PhJ MGP_PWKPhJ_G0029817
protein coding gene Chr6:85042281-85048354 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029645
protein coding gene Chr6:87929835-87935936 (-)
WSB/EiJ MGP_WSBEiJ_G0030183
protein coding gene Chr6:89576922-89582992 (-)



Homology
more
  • Human Ortholog
    ABTB1, ankyrin repeat and BTB domain containing 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ABTB1, ankyrin repeat and BTB domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BPOZ, BTB3, BTBD21, EF1ABP, PP2259
  • Links
    NCBI Gene ID: 80325
    neXtProt AC: NX_Q969K4
    UniProt: Q969K4

  • Chr Location
    3q21.3; chr3:127672928-127680926 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000030083 Ensembl Gene Model | MGI Sequence Detail 6071 C57BL/6J ±  kb
transcript ENSMUST00000032169 Ensembl | MGI Sequence Detail 1845 Not Applicable  
polypeptide ENSMUSP00000032169 Ensembl | MGI Sequence Detail 478 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 62
    cDNA 61
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:2141493
References
more
  • Summaries
    All 25
    Developmental Gene Expression 4
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:215487 Thompson CL, et al., A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. Neuron. 2014 Jul 16;83(2):309-23

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory