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Cttnbp2nl
Gene Detail
Symbol

Name
ID
Cttnbp2nl
CTTNBP2 N-terminal like
MGI:1933137
Synonyms
MGC:7720, mKIAA1433
Feature Type
protein coding gene
Genetic Map
Chromosome 3
45.88 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr3:105001915-105053146 bp, - strand
From VEGA annotation of GRCm38

  51232 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:36371  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: CTTNBP2NL
Gene Tree: Cttnbp2nl

Human
homologs
CTTNBP2NL, CTTNBP2 N-terminal like
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 55917
neXtProt AC: NX_Q9P2B4

Human Chr (Location): 1p13.2; chr1:112396178-112461164 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(15) : Gene trapped(15)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cttnbp2nl interacts with 359 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process negative regulation of transmembrane transport, negative regulation of transporter activity, ...
Component actin cytoskeleton, cytoplasm, ...
Function protein phosphatase 2A binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (106)    Tissues (13)    Images (24)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 106
cDNA source data(101)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase cttnbp2nl    NEW 
Molecular
reagents
All nucleic(102) cDNA(102)
Microarray probesets(7)
Other database
links
VEGA Gene Model OTTMUSG00000053155 (Evidence)
Ensembl Gene Model ENSMUSG00000062127 (Evidence)
Entrez Gene 80281 (Evidence)
UniGene 200327
DFCI TC1579689, TC1594732, TC1671570, TC1695645
DoTS DT.101278979, DT.101716757, DT.527955
NIA Mouse Gene Index U024470
Consensus CDS Project CCDS17707.1
International Mouse Phenotyping Consortium Status Cttnbp2nl
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000053155 VEGA Gene Model | MGI Sequence Detail 51232 C57BL/6J ±  kb
transcript OTTMUST00000132864 VEGA | MGI Sequence Detail 4946 Not Applicable 
polypeptide OTTMUSP00000070771 VEGA | MGI Sequence Detail 638 Not Applicable 

For the selected sequences
All sequences(54) RefSeq(8) UniProt(2)
Polymorphisms
SNPs within 2kb(245 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR019131 Cortactin-binding protein-2, N-terminal
Protein Ontology PR:000006038 CTTNBP2 N-terminal-like protein
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:202963 Sugimoto M, et al., Genetic variants related to gap junctions and hormone secretion influence conception rates in cows. Proc Natl Acad Sci U S A. 2013 Nov 26;110(48):19495-500
All references(34)
Other
accession IDs
MGI:2139592, MGI:2139595, MGI:2139873

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory