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Cttnbp2nl
Gene Detail
 Symbol
Name
ID
Cttnbp2nl
CTTNBP2 N-terminal like
MGI:1933137
Synonyms MGC:7720, mKIAA1433
Feature Type protein coding gene
Genetic Map
Chromosome 3
45.88 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr3:105001915-105053146 bp, - strand
From NCBI annotation of GRCm38

  51232 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:36371  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Cttnbp2nl

Human
homologs
Human Homolog CTTNBP2NL, CTTNBP2 N-terminal like
NCBI Gene ID 55917
neXtProt AC  NX_Q9P2B4
Human Chr (Location)  1p13.2; chr1:112396178-112465081 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(15) : Gene trapped(15)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cttnbp2nl interacts with 360 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process negative regulation of transmembrane transport, negative regulation of transporter activity, ...
Component actin cytoskeleton, cytoplasm, ...
Function protein phosphatase 2A binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (106)    Tissues (13)    Images (24)
Theiler Stages: 23
Assay TypeResults
RNA in situ 106
cDNA source data(101)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(102) cDNA(102)
Microarray probesets(7)
Other database
links
Ensembl Gene ModelENSMUSG00000062127 (Evidence)
Entrez Gene80281 (Evidence)
UniGene200327
DFCITC1579689, TC1594732, TC1671570, TC1695645
DoTSDT.101278979, DT.101716757, DT.527955
NIA Mouse Gene IndexU024470
Consensus CDS ProjectCCDS17707.1
International Mouse Knockout Project StatusCttnbp2nl
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 80281 NCBI Gene Model | MGI Sequence Detail 51232 C57BL/6J ±  kb
transcript NM_030249 RefSeq | MGI Sequence Detail 4946 C57BL/6 
polypeptide Q99LJ0 UniProt | EBI | MGI Sequence Detail 638 Not Applicable 

For the selected sequences
All sequences(43) RefSeq(6) UniProt(1)
Polymorphisms SNPs within 2kb(245 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR019131 Cortactin-binding protein-2, N-terminal
Protein Ontology PR:000006038 CTTNBP2 N-terminal-like protein
Graphical View of Protein Domain Structure
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:202963 Sugimoto M, et al., Genetic variants related to gap junctions and hormone secretion influence conception rates in cows. Proc Natl Acad Sci U S A. 2013 Nov 26;110(48):19495-500
All references(34)
Other
accession IDs
MGI:2139592, MGI:2139595, MGI:2139873

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory