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Parp9 Gene Detail
Summary
  • Symbol
    Parp9
  • Name
    poly (ADP-ribose) polymerase family, member 9
  • Synonyms
    MGC:7868
  • Feature Type
    protein coding gene
  • IDs
    MGI:1933117
    NCBI Gene: 80285
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:35938470-35972605 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 25.43 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    202 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1933117
 protein coding gene Chr16:35938470-35972621 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022774
 protein coding gene Chr16:34291705-34330077 (+)
A/J MGP_AJ_G0022739
 protein coding gene Chr16:32629257-32663270 (+)
AKR/J MGP_AKRJ_G0022712
 protein coding gene Chr16:33772173-33808025 (+)
BALB/cJ MGP_BALBcJ_G0022741
 protein coding gene Chr16:32751791-32785033 (+)
C3H/HeJ MGP_C3HHeJ_G0022506
 protein coding gene Chr16:33899647-33935447 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023190
 protein coding gene Chr16:35027353-35074295 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020708
 protein coding gene Chr16:32984145-33020014 (+)
CAST/EiJ MGP_CASTEiJ_G0022034
 protein coding gene Chr16:34127328-34162262 (+)
CBA/J MGP_CBAJ_G0022476
 protein coding gene Chr16:36450265-36492409 (+)
DBA/2J MGP_DBA2J_G0022609
 protein coding gene Chr16:32452779-32487812 (+)
FVB/NJ MGP_FVBNJ_G0022584
 protein coding gene Chr16:32449596-32482767 (+)
LP/J MGP_LPJ_G0022676
 protein coding gene Chr16:34021777-34059484 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022603
 protein coding gene Chr16:35722544-35759518 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023202
 protein coding gene Chr16:33827840-33866921 (+)
PWK/PhJ MGP_PWKPhJ_G0021775
 protein coding gene Chr16:32864232-32905249 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021606
 protein coding gene Chr16:33646750-33682779 (+)
WSB/EiJ MGP_WSBEiJ_G0022078
 protein coding gene Chr16:33755973-33794920 (+)



Homology
more
  • Human Ortholog
    PARP9, poly(ADP-ribose) polymerase family member 9
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PARP9, poly(ADP-ribose) polymerase family member 9
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ARTD9, BAL, BAL1, MGC:7868
  • Links
    NCBI Gene ID: 83666
    neXtProt AC: NX_Q8IXQ6
    UniProt: Q8IXQ6

  • Chr Location
    3q21.1; chr3:122527910-122564676 (-)  GRCh38.p7
  • HomoloGene
    Vertebrate Homology Class 12720
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: PARP9
  • Gene Tree
    Parp9
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    37
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    115
  • Tissues
    93
  • cDNA Data
    10
  • Literature Summary
    3
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022906 Ensembl Gene Model | MGI Sequence Detail 34136 C57BL/6J ±  kb
transcript ENSMUST00000114878 Ensembl | MGI Sequence Detail 3548 Not Applicable  
polypeptide ENSMUSP00000110528 Ensembl | MGI Sequence Detail 830 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 11
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2146631
References
more
  • Summaries
    All 32
    Developmental Gene Expression 3
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:246409 Robert I, et al., Robust immunoglobulin class switch recombination and end joining in Parp9-deficient mice. Eur J Immunol. 2017 Apr;47(4):665-676
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/11/2020
MGI 6.14 		The Jackson Laboratory