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Ankrd17
Gene Detail
Symbol

Name
ID
Ankrd17
ankyrin repeat domain 17
MGI:1932101
Synonyms
4933425K22Rik, A130069E23Rik, Gtar, mKIAA0697
Feature Type
protein coding gene
Genetic Map
Chromosome 5
44.32 cM, cytoband E2
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr5:90227190-90366185 bp, - strand
From Ensembl annotation of GRCm38

  138996 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:82403  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

Gene Tree: Ankrd17

Human
homologs
Human Homolog ANKRD17, ankyrin repeat domain 17
NCBI Gene ID 26057
neXtProt AC  NX_O75179
Human Synonyms  GTAR, NY-BR-16
Human Chr (Location)  4q13.3; chr4:73074785-73259141 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(133) : Gene trapped(129) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a null mutation display embryonic lethality during organogenesis with hemorrhages, impaired vascular smooth muscle cell development, impaired vascular integrity, and growth retardation.
 
Interactions
Ankrd17 interacts with 421 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process blood vessel maturation, endoderm development, ...
Component cytoplasm, membrane, ...
Function poly(A) RNA binding, RNA binding
External Resources: FuncBase
Expression
Literature Summary: (6 records)
Data Summary: Results (102)    Tissues (47)    Images (14)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 5
In situ reporter (knock in) 20
RT-PCR 29
RNase protection 48
cDNA source data(22)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(32) cDNA(29) Primer pair(3)
Microarray probesets(10)
Other database
links
Ensembl Gene ModelENSMUSG00000055204 (Evidence)
Entrez Gene81702 (Evidence)
NIA Mouse Gene IndexU043848, U108246
Consensus CDS ProjectCCDS57353.1, CCDS57354.1
International Mouse Knockout Project StatusAnkrd17
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000055204 Ensembl Gene Model | MGI Sequence Detail 138996 C57BL/6J ±  kb
transcript ENSMUST00000014421 Ensembl | MGI Sequence Detail 10042 Not Applicable 
polypeptide ENSMUSP00000014421 Ensembl | MGI Sequence Detail 2603 Not Applicable 

For the selected sequences
All sequences(64) RefSeq(14) UniProt(7)
Polymorphisms
SNPs within 2kb(600 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002110 Ankyrin repeat
InterPro IPR020683 Ankyrin repeat-containing domain
InterPro IPR004087 K Homology domain
InterPro IPR004088 K Homology domain, type 1
Protein Ontology PR:000004043 ankyrin repeat domain-containing protein 17
References
(Earliest) J:31729 Forrester LM, et al., An induction gene trap screen in embryonic stem cells: Identification of genes that respond to retinoic acid in vitro. Proc Natl Acad Sci U S A. 1996 Feb 20;93(4):1677-82
(Latest) J:185767 Ray D, et al., Experimental validation of Ankrd17 and Anapc10, two novel meiotic genes predicted by computational models in mice. Biol Reprod. 2012 Apr;86(4):102
All references(42)
Other
accession IDs
MGI:1918421, MGI:2140727, MGI:2140756, MGI:2141077, MGI:2444962

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/21/2014
MGI 5.20
The Jackson Laboratory