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Car13 Gene Detail
Summary
  • Symbol
    Car13
  • Name
    carbonic anhydrase 13
  • Synonyms
    2310075C21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1931322
    NCBI Gene: 71934
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:14641727-14663002 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 3.12 cM, cytoband A2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    171 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1931322
protein coding gene Chr3:14641727-14663002 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027076
protein coding gene Chr3:11772467-11793616 (+)
A/J MGP_AJ_G0027040
protein coding gene Chr3:11757742-11778993 (+)
AKR/J MGP_AKRJ_G0027010
protein coding gene Chr3:11748243-11769514 (+)
BALB/cJ MGP_BALBcJ_G0027049
protein coding gene Chr3:11494971-11516212 (+)
C3H/HeJ MGP_C3HHeJ_G0026789
protein coding gene Chr3:12070552-12092569 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027493
protein coding gene Chr3:12577262-12598515 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024855
protein coding gene Chr3:10081584-10103561 (+)
CAST/EiJ MGP_CASTEiJ_G0026247
protein coding gene Chr3:12064601-12087293 (+)
CBA/J MGP_CBAJ_G0026767
protein coding gene Chr3:12779655-12800906 (+)
DBA/2J MGP_DBA2J_G0026903
protein coding gene Chr3:11333352-11356915 (+)
FVB/NJ MGP_FVBNJ_G0026870
protein coding gene Chr3:11153656-11174893 (+)
LP/J MGP_LPJ_G0027013
protein coding gene Chr3:12350490-12371834 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026891
protein coding gene Chr3:14534693-14561522 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027553
protein coding gene Chr3:11558767-11582697 (+)
PWK/PhJ MGP_PWKPhJ_G0025982
protein coding gene Chr3:11446036-11467278 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025785
protein coding gene Chr3:11606688-11631293 (+)
WSB/EiJ MGP_WSBEiJ_G0026318
protein coding gene Chr3:11623863-11645194 (+)



Homology
more
  • Human Ortholog
    CA13, carbonic anhydrase 13
  • Vertebrate Orthologs
    11
  • Human Ortholog
    CA13, carbonic anhydrase 13
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CAXIII
  • Links
    NCBI Gene ID: 377677
    neXtProt AC: NX_Q8N1Q1
    UniProt: Q8N1Q1

  • Chr Location
    8q21.2; chr8:85245487-85284073 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71934 NCBI Gene Model | MGI Sequence Detail 21276 C57BL/6J ±  kb
transcript NM_024495 RefSeq | MGI Sequence Detail 2299 C57BL/6  
polypeptide Q9D6N1 UniProt | EBI | MGI Sequence Detail 262 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 21
    cDNA 20
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1919184
References
more
  • Summaries
    All 31
    Developmental Gene Expression 6
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:216097 Reibring CG, et al., Expression patterns and subcellular localization of carbonic anhydrases are developmentally regulated during tooth formation. PLoS One. 2014;9(5):e96007

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory