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Car13 Gene Detail
Summary
  • Symbol
    Car13
  • Name
    carbonic anhydrase 13
  • Synonyms
    2310075C21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1931322
    NCBI Gene: 71934
Location & Maps
more
  • Sequence Map
    Chr3:14641727-14663002 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      21276 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 3.12 cM, cytoband A2
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CA13, carbonic anhydrase 13
  • Vertebrate Orthologs
    11
  • Human Ortholog
    CA13, carbonic anhydrase 13
    Orthology source: HomoloGene
  • Synonyms
    CAXIII
  • Links
    NCBI Gene ID: 377677
    neXtProt AC: NX_Q8N1Q1

  • Chr Location
    8q21.2; chr8:85245487-85284073 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    4
  • Gene trapped
    1
  • Targeted
    3
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026447 VEGA Gene Model | MGI Sequence Detail 21276 C57BL/6J ±  kb
transcript OTTMUST00000065408 VEGA | MGI Sequence Detail 2299 Not Applicable  
polypeptide OTTMUSP00000032600 VEGA | MGI Sequence Detail 262 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    171 from dbSNP Build 142
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000004916 carbonic anhydrase 13
  • EC
  • InterPro Domains
    IPR001148 Alpha carbonic anhydrase
    IPR023561 Carbonic anhydrase, alpha-class
    IPR018338 Carbonic anhydrase, alpha-class, conserved site
Molecular
Reagents
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  • All nucleic 20
    cDNA 19
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
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MGI:1919184
References
more
  • Summaries
    All 30
    Developmental Gene Expression 6
    Gene Ontology 4
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:216097 Reibring CG, et al., Expression patterns and subcellular localization of carbonic anhydrases are developmentally regulated during tooth formation. PLoS One. 2014;9(5):e96007

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory