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Ralgapa1
Gene Detail
 Symbol
Name
ID
Ralgapa1
Ral GTPase activating protein, alpha subunit 1
MGI:1931050
Synonyms 2310003F20Rik, 4930400K19Rik, Garnl1, mKIAA0884, Tulip1
Feature Type protein coding gene
Genetic Map
Chromosome 12
24.06 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr12:55602929-55821167 bp, - strand
From Ensembl annotation of GRCm38

  218239 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:84805  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 chicken; 1 zebrafish

Gene Tree: Ralgapa1

Human
homologs
Human Homolog RALGAPA1, Ral GTPase activating protein, alpha subunit 1 (catalytic)
NCBI Gene ID 253959
neXtProt AC  NX_Q6GYQ0
Human Synonyms  GARNL1, GRIPE, p240, RalGAPalpha1, TULIP1
Human Chr (Location)  14q13.2; chr14:35538352-35809226 (-)  GRCh38
Alleles
and
phenotypes
All alleles(14) : Gene trapped(10) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process activation of Ral GTPase activity, positive regulation of Ran GTPase activity, ...
Component cytoplasm, nucleus
Function GTPase activator activity, protein binding, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (21)    Tissues (21)    Images (3)
Theiler Stages: 19, 20, 21, 22, 23, 25, 28
Assay TypeResults
RNA in situ 6
Northern blot 15
cDNA source data(13)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(14) cDNA(13) Other(1)
Microarray probesets(12)
Other database
links
Ensembl Gene ModelENSMUSG00000021027 (Evidence)
Entrez Gene56784 (Evidence)
DoTSDT.101221026, DT.101737104, DT.525183, DT.531716, DT.55283212, DT.60101146, DT.91332980, DT.91334544, DT.91580794, DT.94259765
Consensus CDS ProjectCCDS36452.1
International Mouse Knockout Project StatusRalgapa1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021027 Ensembl Gene Model | MGI Sequence Detail 218239 C57BL/6J ±  kb
transcript ENSMUST00000110687 Ensembl | MGI Sequence Detail 7874 Not Applicable 
polypeptide ENSMUSP00000106315 Ensembl | MGI Sequence Detail 2035 Not Applicable 

For the selected sequences
All sequences(76) RefSeq(21) UniProt(4)
Polymorphisms SNPs within 2kb(557 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR016024 Armadillo-type fold
InterPro IPR000331 Rap GTPase activating proteins domain
Protein Ontology PR:000030880 ral GTPase-activating protein subunit alpha-1
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(32)
Other
accession IDs
MGI:1916733, MGI:1921051, MGI:2144861

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory