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Abhd1 Pseudogene Detail
Summary
  • Symbol
    Abhd1
  • Name
    abhydrolase domain containing 1
  • Synonyms
    alpha/beta hydrolase-1, LABH1, LABH-1
Location &
Maps
more
  • Sequence Map
    Chr5:31107410-31112435 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 16.90 cM, cytoband B1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    37 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1931013
polymorphic pseudogene Chr5:31107410-31112439 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015593
unclassified non-coding RNA gene Chr5:28909322-28914352 (+)
A/J MGP_AJ_G0015569
unclassified non-coding RNA gene Chr5:27972550-27977584 (+)
AKR/J MGP_AKRJ_G0015533
unclassified non-coding RNA gene Chr5:29123926-29128956 (+)
BALB/cJ MGP_BALBcJ_G0015531
unclassified non-coding RNA gene Chr5:28493035-28498065 (+)
C3H/HeJ MGP_C3HHeJ_G0015353
unclassified non-coding RNA gene Chr5:29122394-29127428 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015985
unclassified non-coding RNA gene Chr5:30689323-30694348 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013720
unclassified non-coding RNA gene Chr5:25448975-25453986 (+)
CAST/EiJ MGP_CASTEiJ_G0014909
unclassified non-coding RNA gene Chr5:28217033-28222061 (+)
CBA/J MGP_CBAJ_G0015334
unclassified non-coding RNA gene Chr5:31260033-31265067 (+)
DBA/2J MGP_DBA2J_G0015428
unclassified non-coding RNA gene Chr5:28153363-28158388 (+)
FVB/NJ MGP_FVBNJ_G0015435
unclassified non-coding RNA gene Chr5:27567129-27572163 (+)
LP/J MGP_LPJ_G0015509
unclassified non-coding RNA gene Chr5:29371887-29376917 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015458
unclassified non-coding RNA gene Chr5:32154399-32159433 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016027
unclassified non-coding RNA gene Chr5:28624596-28629621 (+)
PWK/PhJ MGP_PWKPhJ_G0014694
unclassified non-coding RNA gene Chr5:27271163-27276788 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014482
unclassified non-coding RNA gene Chr5:27997256-28002265 (+)
WSB/EiJ MGP_WSBEiJ_G0015013
unclassified non-coding RNA gene Chr5:28688968-28693996 (+)



Homology
more
  • Human Ortholog
    ABHD1, abhydrolase domain containing 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ABHD1, abhydrolase domain containing 1
  • Synonyms
    LABH1
  • Links
    NCBI Gene ID: 84696
    neXtProt AC: NX_Q96SE0
    UniProt: Q96SE0

  • Chr Location
    2p23.3; chr2:27123780-27130812 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    23 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    2
  • Gene trapped
    1
  • Radiation induced
    2
  • Spontaneous
    1
  • Genomic Mutations
    5 involving Abhd1
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000006638 Ensembl Gene Model | MGI Sequence Detail 5026 C57BL/6J ±  kb
transcript ENSMUST00000201125 Ensembl | MGI Sequence Detail 1352 Not Applicable  
polypeptide ENSMUSP00000158679 Ensembl | MGI Sequence Detail 413 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    Genomic 1
    cDNA 8
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 42
    Developmental Gene Expression 2
    Diseases 1
    Phenotypes 23
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/27/2022
MGI 6.21
The Jackson Laboratory