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Trpc4ap Gene Detail
Summary
  • Symbol
    Trpc4ap
  • Name
    transient receptor potential cation channel, subfamily C, member 4 associated protein
  • Synonyms
    4833429F06Rik, D2Ertd113e, Trp4-associated protein TAP1, Trrp4ap
  • Feature Type
    protein coding gene
  • IDs
    MGI:1930751
    NCBI Gene: 56407
  • Gene Overview
    MyGene.info: TRPC4AP
Location & Maps
more
  • Sequence Map
    Chr2:155634271-155692384 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      58114 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 77.26 cM, cytoband H2
  • Mapping Data
    4 experiments
Homology
more
  • Human Ortholog
    TRPC4AP, transient receptor potential cation channel subfamily C member 4 associated protein
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TRPC4AP, transient receptor potential cation channel subfamily C member 4 associated protein
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C20orf188, PPP1R158, TRRP4AP, TRUSS
  • Links
    NCBI Gene ID: 26133
    neXtProt AC: NX_Q8TEL6

  • Chr Location
    20q11.22; chr20:35002404-35092837 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000016133 VEGA Gene Model | MGI Sequence Detail 58114 C57BL/6J ±  kb
transcript OTTMUST00000038562 VEGA | MGI Sequence Detail 3204 Not Applicable  
polypeptide OTTMUSP00000017262 VEGA | MGI Sequence Detail 797 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    384 from dbSNP Build 142
Protein
Information
less
  • UniProt
    7 Sequences
  • Protein Ontology
    PR:000016694 short transient receptor potential channel 4-associated protein
  • InterPro Domains
    IPR016024 Armadillo-type fold
    IPR022162 Protein of unknown function DUF3689
Molecular
Reagents
less
  • All nucleic 17
    cDNA 16
    Primer pair 1

    Microarray probesets 7
Other
Accession IDs
less
MGI:1098722, MGI:2444616
References
more
  • Summaries
    All 30
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:232539 DiTommaso T, et al., Identification of genes important for cutaneous function revealed by a large scale reverse genetic screen in the mouse. PLoS Genet. 2014 Oct;10(10):e1004705

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory