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Hgh1 Gene Detail
Summary
  • Symbol
    Hgh1
  • Name
    HGH1 homolog
  • Synonyms
    Brp16, D15Ertd741e, Fam203a
  • Feature Type
    protein coding gene
  • IDs
    MGI:1930628
    NCBI Gene: 59053
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:76368898-76371437 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 35.78 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    19 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1930628
protein coding gene Chr15:76368860-76371854 (.)
129S1/SvImJ MGP_129S1SvImJ_G0021989
protein coding gene Chr15:76439415-76441920 (+)
A/J MGP_AJ_G0021947
protein coding gene Chr15:73657258-73659763 (+)
AKR/J MGP_AKRJ_G0021930
protein coding gene Chr15:75658356-75660861 (+)
BALB/cJ MGP_BALBcJ_G0021956
protein coding gene Chr15:73685640-73688145 (+)
C3H/HeJ MGP_C3HHeJ_G0021728
protein coding gene Chr15:75702703-75705208 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022396
protein coding gene Chr15:79308637-79311142 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019925
protein coding gene Chr15:70317014-70319510 (+)
CAST/EiJ MGP_CASTEiJ_G0021247
protein coding gene Chr15:76500519-76503020 (+)
CBA/J MGP_CBAJ_G0021695
protein coding gene Chr15:81804167-81806662 (+)
DBA/2J MGP_DBA2J_G0021820
protein coding gene Chr15:73192374-73194879 (+)
FVB/NJ MGP_FVBNJ_G0021800
protein coding gene Chr15:72247793-72250294 (+)
LP/J MGP_LPJ_G0021891
protein coding gene Chr15:76534970-76537475 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021825
protein coding gene Chr15:87140267-87142768 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022416
protein coding gene Chr15:75899245-75901746 (+)
PWK/PhJ MGP_PWKPhJ_G0020988
protein coding gene Chr15:73351314-73353814 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020828
protein coding gene Chr15:75620043-75622541 (+)
WSB/EiJ MGP_WSBEiJ_G0021299
protein coding gene Chr15:76003986-76006491 (+)



Homology
more
  • Human Ortholog
    HGH1, HGH1 homolog
  • Vertebrate Orthologs
    9
  • Human Ortholog
    HGH1, HGH1 homolog
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BRP16, BRP16L, C8orf30A, C8orf30B, FAM203A, FAM203B
  • Links
    NCBI Gene ID: 51236
    neXtProt AC: NX_Q9BTY7
    UniProt: Q9BTY7

  • Chr Location
    8q24.3; chr8:144137721-144140843 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 48742
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: HGH1
  • Gene Tree
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    27 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022554 Ensembl Gene Model | MGI Sequence Detail 2540 C57BL/6J ±  kb
transcript ENSMUST00000023213 Ensembl | MGI Sequence Detail 1993 Not Applicable  
polypeptide ENSMUSP00000023213 Ensembl | MGI Sequence Detail 393 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 33
    cDNA 32
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1289236
References
more
  • Summaries
    All 51
    Developmental Gene Expression 2
    Diseases 1
    Phenotypes 27
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory