Pex3
Gene Detail

Symbol

Name
ID

Pex3
peroxisomal biogenesis factor 3
MGI:1929646

Synonyms

1700014F15Rik, 2810027F19Rik, 2900010N04Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 10
4.89 cM, cytoband A
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr10:13523847-13553139 bp, - strand From VEGA annotation of GRCm38   29293 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate
homology

HomoloGene:2691  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Pex3

Human
homologs

Human Homolog		PEX3, peroxisomal biogenesis factor 3
NCBI Gene ID		8504
neXtProt AC		NX_P56589
Human Synonyms		PBD10A, TRG18
Human Chr (Location)		6q24.2; chr6:143450781-143490616 (+)  GRCh38
Disease Associations		(1) Diseases Associated with Human PEX3

Mutations,
alleles, and
phenotypes

All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )

Interactions

Pex3 interacts with 178 markers (Mir7-1, Mir7-2, Mir7b, ...)

View All

Gene Ontology
(GO)
classifications

All GO classifications: (24 annotations)

Process	amino acid transmembrane transport, peroxisome membrane biogenesis, ...
Component	cytosol, endoplasmic reticulum, ...
Function	amino acid transmembrane transporter activity, lipid binding, ...

This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase

Expression

Literature Summary: (1 records)

Data Summary: Results (3)    Tissues (3)    Tissue x Stage Matrix (view)

Assay Type	Results
RNA in situ	3

cDNA source data(52)
External Resources: Allen Institute   GEO   Expression Atlas

Molecular
reagents

All nucleic(54) Genomic(1) cDNA(53)
Microarray probesets(4)

Other database
links

VEGA Gene Model	OTTMUSG00000020905 (Evidence)
Ensembl Gene Model	ENSMUSG00000019809 (Evidence)
Entrez Gene	56535 (Evidence)
UniGene	282711
NIA Mouse Gene Index	U031549
Consensus CDS Project	CCDS23702.1, CCDS48503.1
International Mouse Knockout Project Status	Pex3

Sequences

Length	Strain/Species
genomic	OTTMUSG00000020905	VEGA Gene Model | MGI Sequence Detail	29293	C57BL/6J
transcript	OTTMUST00000049414	VEGA | MGI Sequence Detail	2129	Not Applicable
polypeptide	OTTMUSP00000022888	VEGA | MGI Sequence Detail	372	Not Applicable

All sequences(62) RefSeq(6) UniProt(11)

Polymorphisms

SNPs within 2kb(314 from dbSNP Build 137)

Protein-related
information

Resource	ID	Description
InterPro	IPR006966	Peroxin-3
Protein Ontology	PR:000012564	peroxisomal biogenesis factor 3

References

(Earliest) J:66341 Muntau AC, et al., Genomic organization, expression analysis, and chromosomal localization of the mouse PEX3 gene encoding a peroxisomal assembly protein. Biol Chem. 2000 Apr;381(4):337-42
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(32)

Other
accession IDs

MGI:1914452, MGI:1914509, MGI:1922773