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Pex3
Gene Detail
Symbol

Name
ID
Pex3
peroxisomal biogenesis factor 3
MGI:1929646
Synonyms
1700014F15Rik, 2810027F19Rik, 2900010N04Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 10
4.89 cM, cytoband A
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr10:13523847-13553139 bp, - strand
From VEGA annotation of GRCm38

  29293 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:2691  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: PEX3
Gene Tree: Pex3

Human
homologs
PEX3, peroxisomal biogenesis factor 3
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 8504
neXtProt AC: NX_P56589

Human Synonyms: PBD10A, TRG18

Human Chr (Location): 6q24.2; chr6:143450781-143490616 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human PEX3

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Pex3 interacts with 177 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (3)    Tissues (3)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 3
cDNA source data(52)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase pex3 ; ZFIN pex3    NEW 
Molecular
reagents
All nucleic(54) Genomic(1) cDNA(53)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000020905 (Evidence)
Ensembl Gene Model ENSMUSG00000019809 (Evidence)
Entrez Gene 56535 (Evidence)
UniGene 282711
NIA Mouse Gene Index U031549
Consensus CDS Project CCDS23702.1, CCDS48503.1
International Mouse Phenotyping Consortium Status Pex3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000020905 VEGA Gene Model | MGI Sequence Detail 29293 C57BL/6J ±  kb
transcript OTTMUST00000049414 VEGA | MGI Sequence Detail 2129 Not Applicable 
polypeptide OTTMUSP00000022888 VEGA | MGI Sequence Detail 372 Not Applicable 

For the selected sequences
All sequences(57) RefSeq(6) UniProt(6)
Polymorphisms
SNPs within 2kb(314 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR006966 Peroxin-3
Protein Ontology PR:000012564 peroxisomal biogenesis factor 3
References
(Earliest) J:66341 Muntau AC, et al., Genomic organization, expression analysis, and chromosomal localization of the mouse PEX3 gene encoding a peroxisomal assembly protein. Biol Chem. 2000 Apr;381(4):337-42
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(31)
Other
accession IDs
MGI:1914452, MGI:1914509, MGI:1922773

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
05/20/2015
MGI 5.22
The Jackson Laboratory