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Rpl23 Gene Detail
Summary
  • Symbol
    Rpl23
  • Name
    ribosomal protein L23
  • Synonyms
    2810009A01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1929455
    NCBI Gene: 65019
  • Gene Overview
    MyGene.info: RPL23
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr11:97777527-97782437 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 61.10 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    44 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1929455
protein coding gene Chr11:97777526-97782439 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019041
protein coding gene Chr11:100249066-100257304 (-)
A/J MGP_AJ_G0019009
protein coding gene Chr11:96104936-96110985 (-)
AKR/J MGP_AKRJ_G0018979
protein coding gene Chr11:99084555-99091712 (-)
BALB/cJ MGP_BALBcJ_G0018982
protein coding gene Chr11:96602236-96610641 (-)
C3H/HeJ MGP_C3HHeJ_G0018796
protein coding gene Chr11:99211848-99217641 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019435
protein coding gene Chr11:103337577-103343228 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017066
protein coding gene Chr11:93560834-93565057 (-)
CAST/EiJ MGP_CASTEiJ_G0018350
protein coding gene Chr11:100078232-100083334 (-)
CBA/J MGP_CBAJ_G0018767
protein coding gene Chr11:107609827-107621878 (-)
DBA/2J MGP_DBA2J_G0018875
protein coding gene Chr11:95655967-95665773 (-)
FVB/NJ MGP_FVBNJ_G0018864
protein coding gene Chr11:95151645-95158057 (-)
LP/J MGP_LPJ_G0018945
protein coding gene Chr11:100746624-100753349 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018891
protein coding gene Chr11:107437758-107444324 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019475
protein coding gene Chr11:99398103-99403692 (-)
PWK/PhJ MGP_PWKPhJ_G0018122
protein coding gene Chr11:96642715-96648401 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017912
protein coding gene Chr11:99111555-99115837 (-)
WSB/EiJ MGP_WSBEiJ_G0018400
protein coding gene Chr11:99294065-99300268 (-)



Homology
more
  • Human Ortholog
    RPL23, ribosomal protein L23
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RPL23, ribosomal protein L23
    Orthology source: HomoloGene, HGNC
  • Synonyms
    L23, rpL17
  • Links
    NCBI Gene ID: 9349
    neXtProt AC: NX_P62829
    UniProt: P62829

  • Chr Location
    17q12; chr17:38850068-38853800 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000071415 Ensembl Gene Model | MGI Sequence Detail 4911 C57BL/6J ±  kb
transcript ENSMUST00000103146 Ensembl | MGI Sequence Detail 1059 Not Applicable  
polypeptide ENSMUSP00000099435 Ensembl | MGI Sequence Detail 140 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 467
    Genomic 1
    cDNA 465
    Other 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1915154
References
more
  • Summaries
    All 44
    Developmental Gene Expression 6
    Gene Ontology 7
    Phenotypes 13
  • Earliest
    J:43998 Zubair M, et al., Structure and expression of the mouse L23mrp gene downstream of the imprinted H19 gene: biallelic expression and lack of interaction with the H19 enhancers. Genomics. 1997 Oct 15;45(2):290-6
  • Latest
    J:239387 Stafford DA, et al., Deletion of the sclerotome-enriched lncRNA PEAT augments ribosomal protein expression. Proc Natl Acad Sci U S A. 2017 Jan 03;114(1):101-106

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory