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Orc6
Gene Detail
Symbol

Name
ID
Orc6
origin recognition complex, subunit 6
MGI:1929285
Synonyms
6720420I10Rik, Orc6l
Feature Type
protein coding gene
Genetic Map
Chromosome 8
41.61 cM, cytoband C3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr8:85299632-85308278 bp, + strand
From Ensembl annotation of GRCm38

  8647 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8635  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Orc6

Human
homologs
Human Homolog ORC6, origin recognition complex, subunit 6
NCBI Gene ID 23594
neXtProt AC  NX_Q9Y5N6
Human Synonyms  ORC6L
Human Chr (Location)  16q12; chr16:46689646-46698394 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human ORC6
Mutations,
alleles, and
phenotypes
All mutations/alleles(15) : Gene trapped(15)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Orc6 interacts with 105 markers (Mir20b, Mir27a, Mir30a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process DNA-dependent DNA replication, DNA replication
Component membrane, nuclear origin of replication recognition complex, ...
Function DNA binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (12)    Images (22)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(7)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(7) cDNA(7)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000031697 (Evidence)
Entrez Gene56452 (Evidence)
DFCITC1577527, TC1630564, TC1649629, TC1743725
Consensus CDS ProjectCCDS22497.1, CCDS52623.1
International Mouse Knockout Project StatusOrc6
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031697 Ensembl Gene Model | MGI Sequence Detail 8647 C57BL/6J ±  kb
transcript ENSMUST00000034132 Ensembl | MGI Sequence Detail 1653 Not Applicable 
polypeptide ENSMUSP00000034132 Ensembl | MGI Sequence Detail 262 Not Applicable 

For the selected sequences
All sequences(33) RefSeq(9) UniProt(3)
Polymorphisms
SNPs within 2kb(117 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR008721 Origin recognition complex, subunit 6
InterPro IPR020529 Origin recognition complex, subunit 6, metazoa/plant
Protein Ontology PR:000012035 origin recognition complex subunit 6
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(34)
Other
accession IDs
MGI:1924394

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory