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1110004F10Rik
Gene Detail
 Symbol
Name
ID
1110004F10Rik
RIKEN cDNA 1110004F10 gene
MGI:1929274
Synonyms sid2057
Feature Type protein coding gene
Genetic Map
Chromosome 7
61.42 cM, cytoband F3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr7:116093301-116105210 bp, + strand
From VEGA annotation of GRCm38

  11910 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8606  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: 1110004F10Rik

Human
homologs
Human Homolog C11orf58, chromosome 11 open reading frame 58
NCBI Gene ID 10944
neXtProt AC  NX_O00193
Human Synonyms  IMAGE145052, SMAP
Human Chr (Location)  11p15.1; chr11:16738601-16758354 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(5) Targeted(4)
Interactions
1110004F10Rik interacts with 234 markers (Mir7-1, Mir9-1, Mir9-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(162)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(162) cDNA(162)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000023018 (Evidence)
Ensembl Gene ModelENSMUSG00000030663 (Evidence)
Entrez Gene56372 (Evidence)
UniGene24231
DFCITC1572336
DoTSDT.110981038, DT.111056860, DT.535460
NIA Mouse Gene IndexU008666, U144720
Consensus CDS ProjectCCDS21766.1
International Mouse Knockout Project Status1110004F10Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023018 VEGA Gene Model | MGI Sequence Detail 11910 C57BL/6J ±  kb
transcript OTTMUST00000055444 VEGA | MGI Sequence Detail 1479 Not Applicable 
polypeptide OTTMUSP00000026550 VEGA | MGI Sequence Detail 181 Not Applicable 

For the selected sequences
All sequences(51) RefSeq(4) UniProt(4)
Polymorphisms SNPs within 2kb(114 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR026714 Small acidic protein
Protein Ontology PR:000015257 small acidic protein
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(31)
Other
accession IDs
MGI:1923535

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory