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Zfp113
Gene Detail
Symbol

Name
ID
Zfp113
zinc finger protein 113
MGI:1929116
Synonyms
4732456B05Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 5
76.97 cM, cytoband G1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:138139702-138155744 bp, - strand
From VEGA annotation of GRCm38

  16043 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:50027  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog

HCOP human homology predictions: ZNF3
Gene Tree: Zfp113

Human
homologs
ZNF3, zinc finger protein 3
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 7551
neXtProt AC: NX_P17036

Human Synonyms: A8-51, HF.12, KOX25, PP838, Zfp113

Human Chr (Location): 7q22.1; chr7:100063847-100082548 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(11) : Gene trapped(7) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Zfp113 interacts with 428 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (2 annotations)
Process biological_process
Function identical protein binding
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (64)    Tissues (43)    Images (7)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 56
RT-PCR 8
cDNA source data(8)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(9) cDNA(8) Primer pair(1)
Microarray probesets(2)
Other database
links
VEGA Gene Model OTTMUSG00000022637 (Evidence)
Ensembl Gene Model ENSMUSG00000037007 (Evidence)
Entrez Gene 56314 (Evidence)
DFCI TC1615697, TC1582277, TC1726915
DoTS DT.101735792, DT.101335592, DT.101138431
NIA Mouse Gene Index U026863
Consensus CDS Project CCDS19791.1
International Mouse Phenotyping Consortium Status Zfp113
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022637 VEGA Gene Model | MGI Sequence Detail 16043 C57BL/6J ±  kb
transcript OTTMUST00000054242 VEGA | MGI Sequence Detail 6470 Not Applicable 
polypeptide OTTMUSP00000025866 VEGA | MGI Sequence Detail 439 Not Applicable 

For the selected sequences
All sequences(38) RefSeq(2) UniProt(4)
Polymorphisms
SNPs within 2kb(61 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001909 Krueppel-associated box
InterPro IPR007087 Zinc finger, C2H2
InterPro IPR015880 Zinc finger, C2H2-like
InterPro IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Protein Ontology PR:000017814 zinc finger protein 3
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(33)
Other
accession IDs
MGI:2442287

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory