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Chst12 Gene Detail
Summary
  • Symbol
    Chst12
  • Name
    carbohydrate sulfotransferase 12
  • Synonyms
    C4S-2, C4ST2, C4ST-2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1929064
    NCBI Gene: 59031
  • Gene Overview
    MyGene.info: CHST12
Location & Maps
more
  • Sequence Map
    Chr5:140505550-140525724 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      20175 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 79.04 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    CHST12, carbohydrate (chondroitin 4) sulfotransferase 12
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CHST12, carbohydrate (chondroitin 4) sulfotransferase 12
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C4S-2, C4ST2, C4ST-2
  • Links
    NCBI Gene ID: 55501
    neXtProt AC: NX_Q9NRB3

  • Chr Location
    7p22; chr7:2403526-2434607 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    34
  • Gene trapped
    32
  • Targeted
    2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000025896 VEGA Gene Model | MGI Sequence Detail 20175 C57BL/6J ±  kb
transcript OTTMUST00000063813 VEGA | MGI Sequence Detail 2331 Not Applicable  
polypeptide OTTMUSP00000031617 VEGA | MGI Sequence Detail 419 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    70 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 45
    cDNA 44
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2140938
References
more
  • Summaries
    All 34
    Developmental Gene Expression 3
    Gene Ontology 3
    Phenotypes 9
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
  • Latest
    J:198500 Nakahara M, et al., Gene-trap mutagenesis using Mol/MSM-1 embryonic stem cells from MSM/Ms mice. Mamm Genome. 2013 Jun;24(5-6):228-39

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/15/2016
MGI 6.04
The Jackson Laboratory