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Copz1 Gene Detail
Summary
  • Symbol
    Copz1
  • Name
    coatomer protein complex, subunit zeta 1
  • Synonyms
    5930435A22Rik, D4Ertd360e, nonclathrin coat protein zeta1-COP
  • Feature Type
    protein coding gene
  • IDs
    MGI:1929063
    NCBI Gene: 56447
  • Gene Overview
    MyGene.info: COPZ1
Location & Maps
more
  • Sequence Map
    Chr15:103272911-103299862 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      26952 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 58.74 cM
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    COPZ1, coatomer protein complex subunit zeta 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    COPZ1, coatomer protein complex subunit zeta 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CGI-120, COPZ, HSPC181, zeta1-COP, zeta-COP
  • Links
    NCBI Gene ID: 22818
    neXtProt AC: NX_P61923

  • Chr Location
    12q13.2-q13.3; chr12:54325090-54351851 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000060992 Ensembl Gene Model | MGI Sequence Detail 26952 C57BL/6J ±  kb
transcript ENSMUST00000100162 Ensembl | MGI Sequence Detail 1669 Not Applicable  
polypeptide ENSMUSP00000097738 Ensembl | MGI Sequence Detail 177 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    158 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 274
    Genomic 1
    cDNA 272
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
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MGI:1196438, MGI:1915335, MGI:2145892
References
more
  • Summaries
    All 34
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:197389 Slater LH, et al., CCT chaperonin complex is required for efficient delivery of anthrax toxin into the cytosol of host cells. Proc Natl Acad Sci U S A. 2013 Jun 11;110(24):9932-7

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/20/2016
MGI 6.05
The Jackson Laboratory