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Acot9
Gene Detail
Symbol

Name
ID
Acot9
acyl-CoA thioesterase 9
MGI:1928939
Synonyms
0610041P13Rik, Acate2, MT-ACT48, p48, U8
Feature Type
protein coding gene
Genetic Map
Chromosome X
72.38 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
ChrX:155262443-155297654 bp, + strand
From VEGA annotation of GRCm38

  35212 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8206  Vertebrate Homology Class
1 human; 2 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

HCOP human homology predictions: ACOT9
Gene Tree: Acot9

Human
homologs
ACOT9, acyl-CoA thioesterase 9
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 23597
neXtProt AC: NX_Q9Y305

Human Synonyms: ACATE2, CGI-16, MTACT48, MT-ACT48

Human Chr (Location): Xp22.11; chrX:23703660-23743290 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(19) : Gene trapped(16) Targeted(3)
Incidental mutations (data from APF )
Interactions
Acot9 interacts with 53 markers (Mir17, Mir20b, Mir27a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (16 annotations)
Process acyl-CoA metabolic process
Component mitochondrion
Function 2,4,4-trimethyl-3-oxopentanoyl-CoA thioesterase activity, 2-oxoglutaryl-CoA thioesterase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (16)    Tissues (3)    Images (12)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 16
cDNA source data(61)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase acot9    NEW 
Molecular
reagents
All nucleic(62) cDNA(62)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000019354 (Evidence)
Ensembl Gene Model ENSMUSG00000025287 (Evidence)
Entrez Gene 56360 (Evidence)
UniGene 268710
DoTS DT.101741120, DT.488427, DT.97409524
EC 3.1.2.2, 3.1.2.-
Consensus CDS Project CCDS41187.1
International Mouse Phenotyping Consortium Status Acot9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019354 VEGA Gene Model | MGI Sequence Detail 35212 C57BL/6J ±  kb
transcript OTTMUST00000046206 VEGA | MGI Sequence Detail 1752 Not Applicable 
polypeptide OTTMUSP00000020876 VEGA | MGI Sequence Detail 439 Not Applicable 

For the selected sequences
All sequences(37) RefSeq(4) UniProt(2)
Polymorphisms
SNPs within 2kb(92 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000003641 acyl-coenzyme A thioesterase 9, mitochondrial
References
(Earliest) J:66335 Poupon V, et al., Molecular cloning and characterization of MT-ACT48, a novel mitochondrial acyl-CoA thioesterase. J Biol Chem. 1999 Jul 2;274(27):19188-94
(Latest) J:180006 Yokoyama K, et al., NYAP: a phosphoprotein family that links PI3K to WAVE1 signalling in neurons. EMBO J. 2011 Nov 30;30(23):4739-54
All references(32)
Other
accession IDs
MGI:1914100, MGI:2148044

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory