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Rpl35a
Gene Detail
Symbol

Name
ID
Rpl35a
ribosomal protein L35A
MGI:1928894
Synonyms
2810431L15Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 16
23.59 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr16:33056453-33060189 bp, + strand
From VEGA annotation of GRCm38

  3737 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:129020  Vertebrate Homology Class
1 human; 1 mouse; 2 rat; 1 chimpanzee; 4 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: RPL35A
Protein SuperFamily: ribosomal protein L35a
Gene Tree: Rpl35a

Human
homologs
RPL35A, ribosomal protein L35a
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 6165
neXtProt AC: NX_P18077

Human Synonyms: DBA5, L35A

Human Chr (Location): 3q29; chr3:197950181-197955851 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human RPL35A

Mutations,
alleles, and
phenotypes
All mutations/alleles(22) : Gene trapped(22)
Incidental mutations (data from APF )
Interactions
Rpl35a interacts with 7 markers (Mir335, Mir381, Mir539, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (4 records)
Data Summary: Results (45)    Tissues (17)    Images (15)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 45
cDNA source data(244)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase rpl35a ; ZFIN rpl35a    NEW 
Molecular
reagents
All nucleic(245) cDNA(245)
Microarray probesets(13)
Other database
links
VEGA Gene Model OTTMUSG00000024790 (Evidence)
Ensembl Gene Model ENSMUSG00000060636 (Evidence)
Entrez Gene 57808 (Evidence)
UniGene 19355
DoTS DT.97345391, DT.101375943, DT.101246103, DT.97345388, DT.94391944, DT.101376020, DT.101399686, DT.94350284
Consensus CDS Project CCDS28126.1
International Mouse Phenotyping Consortium Status Rpl35a
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024790 VEGA Gene Model | MGI Sequence Detail 3737 C57BL/6J ±  kb
transcript OTTMUST00000061051 VEGA | MGI Sequence Detail 491 Not Applicable 
polypeptide OTTMUSP00000029872 VEGA | MGI Sequence Detail 110 Not Applicable 

For the selected sequences
All sequences(60) RefSeq(6) UniProt(4)
Polymorphisms
SNPs within 2kb(43 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001780 Ribosomal protein L35A
InterPro IPR018266 Ribosomal protein L35Ae, conserved site
InterPro IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
Protein Ontology PR:000014218 60S ribosomal protein L35a
References
(Earliest) J:62506 Hemberger M, et al., cDNA subtraction cloning reveals novel genes whose temporal and spatial expression indicates association with trophoblast invasion. Dev Biol. 2000 Jun 1;222(1):158-69
(Latest) J:173414 Kondrashov N, et al., Ribosome-mediated specificity in Hox mRNA translation and vertebrate tissue patterning. Cell. 2011 Apr 29;145(3):383-97
All references(31)
Other
accession IDs
MGI:1915504

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory