B4galt3
Gene Detail

Symbol Name ID

B4galt3 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 MGI:1928767

Synonyms

9530061M23Rik, beta4GalT-III, ESTM26, R74981

Feature Type

protein coding gene

Genetic Map

Chromosome 1

79.29 cM
Detailed Genetic Map ± 1 cM


Mapping data(5)

Sequence Map

Chr1:171270328-171276896 bp, + strand From VEGA annotation of GRCm38   6569 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:48241  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: beta-1,4-galactosyltransferase, B4GalT1-6 types
Gene Tree: B4galt3

Human homologs

Human Homolog		B4GALT3, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3
NCBI Gene ID		8703
neXtProt AC		NX_O60512
Human Synonyms		beta4Gal-T3
Human Chr (Location)		1q21-q23; chr1:161141100-161147758 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(3) : Targeted(2) Gene trapped(1)

Gene Ontology (GO) classifications

All GO classifications: (11 annotations)

Process	carbohydrate metabolic process
Component	cytoplasm, Golgi apparatus, ...
Function	beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity, metal ion binding, ...

External Resources: FuncBase

Expression

Literature Summary: (2 records)
Data Summary: Results (103)    Tissues (103)    Images (13)
Theiler Stages: 19, 22, 28

Assay Type	Results
RNA in situ	94
Northern blot	9

cDNA source data(11)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(14) Genomic(2) cDNA(11) Primer pair(1)
Microarray probesets(3)

Other database links

VEGA Gene Model	OTTMUSG00000021683 (Evidence)
Ensembl Gene Model	ENSMUSG00000052423 (Evidence)
Entrez Gene	57370 (Evidence)
NIA Mouse Gene Index	U088081
EC	2.4.1.-, 2.4.1.38, 2.4.1.90
Consensus CDS Project	CCDS15486.1
International Mouse Knockout Project Status	B4galt3

Sequences

Length	Strain/Species
genomic	OTTMUSG00000021683	VEGA Gene Model | MGI Sequence Detail	6569	C57BL/6J
transcript	OTTMUST00000051449	VEGA | MGI Sequence Detail	1998	Not Applicable
polypeptide	OTTMUSP00000024219	VEGA | MGI Sequence Detail	395	Not Applicable

All sequences(55) RefSeq(2) UniProt(4)

Polymorphisms

RFLP(1) : SNPs(32 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR003859	Galactosyltransferase, metazoa
Protein Ontology	PR:000004607	beta-1,4-galactosyltransferase 3

References

(Earliest) J:37823 Tchernev VT, et al., Genetic mapping of 20 novel expressed sequence tags from midgestation mouse embryos suggests chromosomal clustering. Genomics. 1997 Feb 15;40(1):170-4
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(38)

Other accession IDs

MGD-MRK-28118, MGI:104824, MGI:1334438, MGI:1915539, MGI:2138567, MGI:2138730