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Rab2a
Gene Detail
 Symbol
Name
ID
Rab2a
RAB2A, member RAS oncogene family
MGI:1928750
Synonyms 9330148M11Rik, Rab2
Feature Type protein coding gene
Genetic Map
Chromosome 4
3.63 cM, cytoband A1
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr4:8535644-8607778 bp, + strand
From VEGA annotation of GRCm38

  72135 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:20628  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: Ras-related protein Rab
Gene Tree: Rab2a

Human
homologs
Human Homolog RAB2A, RAB2A, member RAS oncogene family
NCBI Gene ID 5862
neXtProt AC  NX_P61019
Human Synonyms  LHX, RAB2
Human Chr (Location)  8q12.1; chr8:60516910-60623644 (+)  GRCh38
Alleles
and
phenotypes
All alleles(7) : Gene trapped(7)
Gene Ontology
(GO)
classifications
All GO classifications: (22 annotations)
Process GTP catabolic process, intracellular protein transport, ...
Component cell, endoplasmic reticulum, ...
Function GDP binding, GTPase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (8)    Tissues (8)    Images (1)
Theiler Stages: 14, 15, 17, 19
Assay TypeResults
RNA in situ 6
RT-PCR 2
cDNA source data(154)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(155) cDNA(154) Primer pair(1)
Microarray probesets(9)
Other database
links
VEGA Gene ModelOTTMUSG00000004419 (Evidence)
Ensembl Gene ModelENSMUSG00000047187 (Evidence)
Entrez Gene59021 (Evidence)
UniGene397471
DFCITC1572013, TC1641497
DoTSDT.101720213, DT.495920, DT.94343332
NIA Mouse Gene IndexU004051, U045319
Consensus CDS ProjectCCDS17955.1
International Mouse Knockout Project StatusRab2a
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000004419 VEGA Gene Model | MGI Sequence Detail 72135 C57BL/6J ±  kb
transcript OTTMUST00000010010 VEGA | MGI Sequence Detail 2133 Not Applicable 
polypeptide OTTMUSP00000004796 VEGA | MGI Sequence Detail 212 Not Applicable 

For the selected sequences
All sequences(50) RefSeq(4) UniProt(4)
Polymorphisms SNPs within 2kb(458 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR001806 Small GTPase superfamily
InterPro IPR003579 Small GTPase superfamily, Rab type
InterPro IPR005225 Small GTP-binding protein domain
Protein Ontology PR:000013603 ras-related protein Rab-2A
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(44)
Other
accession IDs
MGI:1915381, MGI:2135555

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory