Rab2a
Gene Detail

Symbol Name ID

Rab2a RAB2A, member RAS oncogene family MGI:1928750

Synonyms

9330148M11Rik, Rab2

Feature Type

protein coding gene

Genetic Map

Chromosome 4

3.63 cM, cytoband A1
Detailed Genetic Map ± 1 cM


Mapping data(4)

Sequence Map

Chr4:8535644-8607778 bp, + strand From VEGA annotation of GRCm38   72135 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:20628  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: Ras-related protein Rab
Gene Tree: Rab2a

Human homologs

Human Homolog		RAB2A, RAB2A, member RAS oncogene family
NCBI Gene ID		5862
neXtProt AC		NX_P61019
Human Synonyms		LHX, RAB2
Human Chr (Location)		8q12.1; chr8:61429469-61536203 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(7) : Gene trapped(7)

Gene Ontology (GO) classifications

All GO classifications: (18 annotations)

Process	GTP catabolic process, intracellular protein transport, ...
Component	endoplasmic reticulum, endoplasmic reticulum membrane, ...
Function	GDP binding, GTPase activity, ...

External Resources: FuncBase

Expression

Literature Summary: (2 records)
Data Summary: Results (8)    Tissues (8)    Images (1)
Theiler Stages: 14, 15, 17, 19

Assay Type	Results
RNA in situ	6
RT-PCR	2

cDNA source data(15)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(16) cDNA(15) Primer pair(1)
Microarray probesets(9)

Other database links

VEGA Gene Model	OTTMUSG00000004419 (Evidence)
Ensembl Gene Model	ENSMUSG00000047187 (Evidence)
Entrez Gene	59021 (Evidence)
DFCI	TC1572013, TC1641497
DoTS	DT.101720213, DT.495920, DT.94343332
NIA Mouse Gene Index	U004051, U045319
Consensus CDS Project	CCDS17955.1
International Mouse Knockout Project Status	Rab2a

Sequences

Length	Strain/Species
genomic	OTTMUSG00000004419	VEGA Gene Model | MGI Sequence Detail	72135	C57BL/6J
transcript	OTTMUST00000010010	VEGA | MGI Sequence Detail	2133	Not Applicable
polypeptide	OTTMUSP00000004796	VEGA | MGI Sequence Detail	212	Not Applicable

All sequences(48) RefSeq(2) UniProt(4)

Polymorphisms

SNPs(314 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR027417	P-loop containing nucleoside triphosphate hydrolase
InterPro	IPR001806	Small GTPase superfamily
InterPro	IPR003579	Small GTPase superfamily, Rab type
InterPro	IPR005225	Small GTP-binding protein domain
Protein Ontology	PR:000013603	ras-related protein Rab-2A

References

(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(43)

Other accession IDs

MGI:1915381, MGI:2135555