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Slc25a20 Gene Detail
Summary
  • Symbol
    Slc25a20
  • Name
    solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20
  • Synonyms
    1110007P09Rik, Cact, mCAC
  • Feature Type
    protein coding gene
  • IDs
    MGI:1928738
    NCBI Gene: 57279
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:108662098-108684641 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 59.61 cM, cytoband F2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    118 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1928738
protein coding gene Chr9:108662088-108684641 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035310
protein coding gene Chr9:110642165-110664128 (+)
A/J MGP_AJ_G0035289
protein coding gene Chr9:106582503-106606499 (+)
AKR/J MGP_AKRJ_G0035221
protein coding gene Chr9:109258766-109281696 (+)
BALB/cJ MGP_BALBcJ_G0035283
protein coding gene Chr9:106280041-106301659 (+)
C3H/HeJ MGP_C3HHeJ_G0034993
protein coding gene Chr9:109658050-109681436 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035803
protein coding gene Chr9:113661521-113687647 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032701
protein coding gene Chr9:104007798-104027531 (+)
CAST/EiJ MGP_CASTEiJ_G0034304
protein coding gene Chr9:109616211-109638290 (+)
CBA/J MGP_CBAJ_G0034961
protein coding gene Chr9:117678489-117701366 (+)
DBA/2J MGP_DBA2J_G0035122
protein coding gene Chr9:106037882-106062000 (+)
FVB/NJ MGP_FVBNJ_G0035070
protein coding gene Chr9:104804402-104826743 (+)
LP/J MGP_LPJ_G0035198
protein coding gene Chr9:110835158-110855863 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035109
protein coding gene Chr9:119233795-119259628 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035824
protein coding gene Chr9:109532052-109554984 (+)
PWK/PhJ MGP_PWKPhJ_G0034011
protein coding gene Chr9:106370169-106391739 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033846
protein coding gene Chr9:109600493-109623486 (+)
WSB/EiJ MGP_WSBEiJ_G0034425
protein coding gene Chr9:109419955-109441981 (+)



Homology
more
  • Human Ortholog
    SLC25A20, solute carrier family 25 member 20
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SLC25A20, solute carrier family 25 member 20
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CAC, CACT
  • Links
    NCBI Gene ID: 788
    neXtProt AC: NX_O43772
    UniProt: O43772

  • Chr Location
    3p21.31; chr3:48856923-48898993 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    16 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 57279 NCBI Gene Model | MGI Sequence Detail 22544 C57BL/6J ±  kb
    transcript NM_020520 RefSeq | MGI Sequence Detail 1746 C57BL/6  
    polypeptide Q9Z2Z6 UniProt | EBI | MGI Sequence Detail 301 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      2 Sequences
    • Protein Ontology
      PR:000015016 mitochondrial carnitine/acylcarnitine carrier protein
    • InterPro Domains
      IPR040062 Mitochondrial carrier domain protein
      IPR023395 Mitochondrial carrier domain superfamily
      IPR018108 Mitochondrial substrate/solute carrier
    Molecular
    Reagents
    less
    • All nucleic 85
      cDNA 84
      Primer pair 1

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:1919042, MGI:2143399
    References
    more
    • Summaries
      All 44
      Developmental Gene Expression 1
      Gene Ontology 6
      Phenotypes 11
    • Earliest
      J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
    • Latest
      J:261316 Perez-Garcia V, et al., Placentation defects are highly prevalent in embryonic lethal mouse mutants. Nature. 2018 Mar 22;555(7697):463-468

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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    last database update
    03/13/2019
    MGI 6.13
    The Jackson Laboratory