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Slc25a20 Gene Detail
Summary
  • Symbol
    Slc25a20
  • Name
    solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20
  • Synonyms
    1110007P09Rik, Cact, mCAC
  • Feature Type
    protein coding gene
  • IDs
    MGI:1928738
    NCBI Gene: 57279
Location & Maps
more
  • Sequence Map
    Chr9:108662088-108684641 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      22554 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 59.61 cM, cytoband F2
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    SLC25A20, solute carrier family 25 member 20
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SLC25A20, solute carrier family 25 member 20
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CAC, CACT
  • Links
    NCBI Gene ID: 788
    neXtProt AC: NX_O43772

  • Chr Location
    3p21.31; chr3:48856923-48898993 (-)  GRCh38.p2

Human Diseases
more
  • Diseases
    1 with human SLC25A20 associations

Human Disease Mouse Models
       Carnitine-Acylcarnitine Translocase Deficiency; CACTD   OMIM: 212138
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotypes from 1 allele in 2 genetic backgrounds
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000050670 VEGA Gene Model | MGI Sequence Detail 22554 C57BL/6J ±  kb
transcript OTTMUST00000128446 VEGA | MGI Sequence Detail 1783 Not Applicable  
polypeptide OTTMUSP00000069097 VEGA | MGI Sequence Detail 301 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    118 from dbSNP Build 142
Protein
Information
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  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000015016 mitochondrial carnitine/acylcarnitine carrier protein
  • InterPro Domains
    IPR023395 Mitochondrial carrier domain
    IPR018108 Mitochondrial substrate/solute carrier
Molecular
Reagents
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  • All nucleic 84
    cDNA 83
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
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MGI:1919042, MGI:2143399
References
more
  • Summaries
    All 40
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 9
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory