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Slc25a20
Gene Detail
 Symbol
Name
ID
Slc25a20
solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20
MGI:1928738
Synonyms 1110007P09Rik, Cact, mCAC
Feature Type protein coding gene
Genetic Map
Chromosome 9
59.61 cM, cytoband F2
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr9:108662098-108684641 bp, + strand
From NCBI annotation of GRCm38

  22544 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:331  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Slc25a20

Human
homologs
Human Homolog SLC25A20, solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
NCBI Gene ID 788
neXtProt AC  NX_O43772
Human Synonyms  CAC, CACT
Human Chr (Location)  3p21.31; chr3:48856923-48898993 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human SLC25A20
Mutations,
alleles, and
phenotypes
All mutations/alleles(17) : Gene trapped(15) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slc25a20 interacts with 129 markers (Mir19a, Mir19b-1, Mir19b-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process transport
Component integral component of membrane, membrane, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (1)    Tissues (1)    Images (1)
Theiler Stages: 23
Assay TypeResults
RNA in situ 1
cDNA source data(83)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(84) cDNA(83) Primer pair(1)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000032602 (Evidence)
Entrez Gene57279 (Evidence)
UniGene29666
DFCITC1576129
DoTSDT.101333109, DT.534996, DT.97402664
NIA Mouse Gene IndexU011036
Consensus CDS ProjectCCDS23535.1
International Mouse Knockout Project StatusSlc25a20
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 57279 NCBI Gene Model | MGI Sequence Detail 22544 C57BL/6J ±  kb
transcript NM_020520 RefSeq | MGI Sequence Detail 1783 C57BL/6 
polypeptide Q9Z2Z6 UniProt | EBI | MGI Sequence Detail 301 Not Applicable 

For the selected sequences
All sequences(25) RefSeq(2) UniProt(2)
Polymorphisms SNPs within 2kb(120 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR023395 Mitochondrial carrier domain
InterPro IPR018108 Mitochondrial substrate/solute carrier
Protein Ontology PR:000015016 mitochondrial carnitine/acylcarnitine carrier protein
Graphical View of Protein Domain Structure
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(43)
Other
accession IDs
MGI:1919042, MGI:2143399

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory