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Nudt3 Gene Detail
Summary
  • Symbol
    Nudt3
  • Name
    nudix hydrolase 3
  • Synonyms
    1110011B09Rik, diphosphoinositol polyphosphate phosphohydrolase, Dipp, nudix (nucleoside diphosphate linked moiety X)-type motif 3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1928484
    NCBI Gene: 56409
  • Alliance
    gene page
  • Transcription Start Sites
    15 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:27798356-27842426 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 14.59 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    963 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1928484
 protein coding gene Chr17:27798356-27842469 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023423
 protein coding gene Chr17:26893897-26940121 (-)
A/J MGP_AJ_G0023381
 protein coding gene Chr17:26042198-26088786 (-)
AKR/J MGP_AKRJ_G0023346
 protein coding gene Chr17:26206145-26249422 (-)
BALB/cJ MGP_BALBcJ_G0023386
 protein coding gene Chr17:26316287-26361130 (-)
C3H/HeJ MGP_C3HHeJ_G0023147
 protein coding gene Chr17:26574815-26619639 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023828
 protein coding gene Chr17:28008763-28054265 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021303
 protein coding gene Chr17:23426706-23473695 (-)
CAST/EiJ MGP_CASTEiJ_G0022648
 protein coding gene Chr17:26523948-26585140 (-)
CBA/J MGP_CBAJ_G0023121
 protein coding gene Chr17:28969411-29024879 (-)
DBA/2J MGP_DBA2J_G0023252
 protein coding gene Chr17:25604202-25648325 (-)
FVB/NJ MGP_FVBNJ_G0023222
 protein coding gene Chr17:25387473-25431829 (-)
LP/J MGP_LPJ_G0023330
 protein coding gene Chr17:27153964-27203797 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023240
 protein coding gene Chr17:28464559-28511447 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023870
 protein coding gene Chr17:26615129-26668208 (-)
PWK/PhJ MGP_PWKPhJ_G0022398
 protein coding gene Chr17:24387748-24437485 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022216
 protein coding gene Chr17:24616335-24666867 (-)
WSB/EiJ MGP_WSBEiJ_G0022710
 protein coding gene Chr17:26596338-26645841 (-)



Homology
more
  • Human Ortholog
    NUDT3, nudix hydrolase 3
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    NUDT3, nudix hydrolase 3
  • Synonyms
    DIPP, DIPP-1, DIPP1
  • Links
    NCBI Gene ID: 11165
    UniProt: O95989

  • Chr Location
    6p21.31; chr6:34279679-34392669 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    71
  • GO References
    12
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 56409 NCBI Gene Model | MGI Sequence Detail 44071 C57BL/6J ±  kb
transcript NM_001291046 RefSeq | MGI Sequence Detail 2188 C57BL/6  
polypeptide Q9JI46 UniProt | EBI | MGI Sequence Detail 168 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000011494 diphosphoinositol polyphosphate phosphohydrolase 1
    (term hierarchy)
  • GlyGen
    Q9JI46 3 sites, 1 N-linked glycan (1 site), 1 O-linked glycan (2 sites)
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 3
Other
Accession IDs
less
MGI:1915745, MGI:2146786
References
more
  • Summaries
    All 42
    Gene Ontology 12
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory