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Hspb3
Gene Detail
Symbol

Name
ID
Hspb3
heat shock protein 3
MGI:1928479
Synonyms
2310035K17Rik, 27kDa, spb3
Feature Type
protein coding gene
Genetic Map
Chromosome 13
64.01 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr13:113662896-113663676 bp, - strand
From NCBI annotation of GRCm38

  781 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:31369  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: HSPB3
Gene Tree: Hspb3

Human
homologs
HSPB3, heat shock 27kDa protein 3
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 8988
neXtProt AC: NX_Q12988

Human Synonyms: DHMN2C, HMN2C, HSPL27

Human Chr (Location): 5q11.2; chr5:54455601-54456384 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human HSPB3

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Interactions
Hspb3 interacts with 15 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (2 annotations)
Component cytoplasm, nucleus
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (124)    Tissues (14)    Images (23)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 124
cDNA source data(4)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase hspb3    NEW 
Molecular
reagents
All nucleic(4) cDNA(4)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000051456 (Evidence)
Entrez Gene 56534 (Evidence)
UniGene 41410
DFCI TC1587172
DoTS DT.60104315
NIA Mouse Gene Index U035192
Consensus CDS Project CCDS26785.1
International Mouse Phenotyping Consortium Status Hspb3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 56534 NCBI Gene Model | MGI Sequence Detail 781 C57BL/6J ±  kb
transcript NM_019960 RefSeq | MGI Sequence Detail 781 C57BL/6 
polypeptide Q9QZ57 UniProt | EBI | MGI Sequence Detail 154 Not Applicable 

For the selected sequences
All sequences(15) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(47 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001436 Alpha crystallin/Heat shock protein
InterPro IPR002068 Alpha crystallin/Hsp20 domain
InterPro IPR008978 HSP20-like chaperone
Protein Ontology PR:000008817 heat shock protein beta-3
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(26)
Other
accession IDs
MGI:1916838, MGI:2145297

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory