About   Help   FAQ
Trip4
Gene Detail
Symbol

Name
ID
Trip4
thyroid hormone receptor interactor 4
MGI:1928469
Synonyms
4930558E03Rik, ASC-1
Feature Type
protein coding gene
Genetic Map
Chromosome 9
35.55 cM, cytoband D
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr9:65831136-65908794 bp, - strand
From VEGA annotation of GRCm38

  77659 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:9426  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Trip4

Human
homologs
Human Homolog TRIP4, thyroid hormone receptor interactor 4
NCBI Gene ID 9325
neXtProt AC  NX_Q15650
Human Synonyms  ASC1, ASC-1, HsT17391, ZC2HC5
Human Chr (Location)  15q22.31; chr15:64387804-64455303 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(23) : Gene trapped(21) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Trip4 interacts with 380 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process regulation of transcription, DNA-templated, toxin transport, ...
Component cytoplasm, cytoskeleton, ...
Function ligand-dependent nuclear receptor binding, metal ion binding, ...
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (78)    Tissues (27)    Images (25)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 78
cDNA source data(12)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(15) cDNA(15)
Microarray probesets(7)
Other database
links
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029847 VEGA Gene Model | MGI Sequence Detail 77659 C57BL/6J ±  kb
transcript OTTMUST00000074067 VEGA | MGI Sequence Detail 4211 Not Applicable 
polypeptide OTTMUSP00000038429 VEGA | MGI Sequence Detail 581 Not Applicable 

For the selected sequences
All sequences(87) RefSeq(16) UniProt(4)
Polymorphisms
SNPs within 2kb(256 from dbSNP Build 137)    SNPs within 2kb including multiple locations(266)
Protein-related
information
ResourceIDDescription
InterPro IPR007374 ASCH domain
InterPro IPR015947 PUA-like domain
InterPro IPR009349 Zinc finger, C2HC5-type
Protein Ontology PR:000016673 activating signal cointegrator 1
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:197389 Slater LH, et al., CCT chaperonin complex is required for efficient delivery of anthrax toxin into the cytosol of host cells. Proc Natl Acad Sci U S A. 2013 Jun 11;110(24):9932-7
All references(37)
Other
accession IDs
MGI:1922616, MGI:2143370

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/08/2014
MGI 5.20
The Jackson Laboratory