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Dpt
Gene Detail
 Symbol
Name
ID
Dpt
dermatopontin
MGI:1928392
Synonyms 1810032B19Rik, 5033416F05Rik, early quiescence protein-1, EQ-1
Feature Type protein coding gene
Genetic Map
Chromosome 1
72.12 cM, cytoband H2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:164796732-164824266 bp, + strand
From NCBI annotation of GRCm38

  27535 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:1458  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Dpt

Human
homologs
Human Homolog DPT, dermatopontin
NCBI Gene ID 1805
neXtProt AC  NX_Q07507
Human Synonyms  TRAMP
Human Chr (Location)  1q12-q23; chr1:168695457-168729204 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from APF )
 
Homozygotes for a targeted null mutation exhibit skin with increased elasticity, decreased thickness, and reduced collagen content, and possess more subcutaneous adipose tissue. Corneal thickness is reduced as well.
 
Interactions
Dpt interacts with 153 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process cell adhesion, collagen fibril organization, ...
Component extracellular matrix, extracellular region, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (109)    Tissues (13)    Images (24)
Theiler Stages: 23, 24
Assay TypeResults
RNA in situ 109
cDNA source data(74)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(74) cDNA(74)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000026574 (Evidence)
Entrez Gene56429 (Evidence)
UniGene28935
DFCITC1580976, TC1676087
DoTSDT.494746
NIA Mouse Gene IndexU001026
Consensus CDS ProjectCCDS15437.1
International Mouse Knockout Project StatusDpt
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 56429 NCBI Gene Model | MGI Sequence Detail 27535 C57BL/6J ±  kb
transcript NM_019759 RefSeq | MGI Sequence Detail 1636 C57BL/6 
polypeptide Q9QZZ6 UniProt | EBI | MGI Sequence Detail 201 Not Applicable 

For the selected sequences
All sequences(16) RefSeq(2) UniProt(1)
Polymorphisms SNPs within 2kb(481 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR026645 Dermatopontin family
Protein Ontology PR:000006670 dermatopontin
Graphical View of Protein Domain Structure
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(35)
Other
accession IDs
MGI:1921422, MGI:1925481

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory