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Vsig2 Gene Detail
Summary
  • Symbol
    Vsig2
  • Name
    V-set and immunoglobulin domain containing 2
  • Synonyms
    1190004B15Rik, 2210413P10Rik, CTM, CTX
  • Feature Type
    protein coding gene
  • IDs
    MGI:1928009
    NCBI Gene: 57276
  • Gene Overview
    MyGene.info: VSIG2
Location & Maps
more
  • Sequence Map
    Chr9:37539255-37544205 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      4951 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 20.78 cM, cytoband B
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    VSIG2, V-set and immunoglobulin domain containing 2
  • Vertebrate Orthologs
    8
  • Human Ortholog
    VSIG2, V-set and immunoglobulin domain containing 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    2210413P10Rik, CTH, CTXL
  • Links
    NCBI Gene ID: 23584
    neXtProt AC: NX_Q96IQ7

  • Chr Location
    11q24.2; chr11:124747472-124753025 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    7
  • Gene trapped
    2
  • Targeted
    5
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000001943 Ensembl Gene Model | MGI Sequence Detail 4951 C57BL/6J ±  kb
transcript ENSMUST00000002008 Ensembl | MGI Sequence Detail 1170 Not Applicable  
polypeptide ENSMUSP00000002008 Ensembl | MGI Sequence Detail 328 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    59 from dbSNP Build 142
Protein
Information
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Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
Other
Accession IDs
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MGI:1916153, MGI:1919617, MGI:2143229
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:64925 Chretien I, et al., CTX, a Xenopus thymocyte receptor, defines a molecular family conserved throughout vertebrates. Eur J Immunol. 1998 Dec;28(12):4094-104
  • Latest
    J:229257 Gu Z, et al., Expression of the immunoglobulin superfamily cell adhesion molecules in the developing spinal cord and dorsal root ganglion. PLoS One. 2015;10(3):e0121550

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory